Strain Fitness in Shewanella loihica PV-4 around Shew_2536
Experiment: Vancomycin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vancomycin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,993,619 | + | Shew_2535 | 0.46 | -0.1 | |
2,994,378 | + | +0.9 | |||
2,994,655 | + | Shew_2536 | 0.23 | +0.4 | |
2,994,737 | + | Shew_2536 | 0.41 | -1.4 | |
2,994,958 | + | Shew_2536 | 0.87 | +0.2 | |
2,995,031 | + | +0.2 | |||
2,995,127 | - | +0.2 | |||
2,995,157 | + | -1.1 | |||
2,995,435 | - | Shew_2537 | 0.12 | -0.0 | |
2,995,519 | - | Shew_2537 | 0.21 | +0.1 | |
2,995,668 | - | Shew_2537 | 0.37 | -2.6 |
Or see this region's nucleotide sequence