Strain Fitness in Shewanella loihica PV-4 around Shew_2532

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
2,988,190	+				+0.0
2,988,207	-				+0.1
2,988,347	+				+0.7
2,988,563	+				+0.3
2,988,563	+				-0.4
2,988,563	+				-1.3
2,988,563	+				-0.6
2,988,563	+				+0.6
2,988,563	+				+0.5
2,988,571	-				+0.2
2,988,571	-				-1.1
2,988,571	-				-0.3
2,988,571	-				-0.2
2,988,631	-				+0.2
2,988,631	-				+0.2
2,988,647	+				+0.5
2,988,655	-				+0.6
2,988,774	-				+0.3
2,989,156	-		Shew_2532	0.23	+0.7
2,989,366	+		Shew_2532	0.49	-0.0
2,989,374	-		Shew_2532	0.50	+0.5
2,989,387	+		Shew_2532	0.52	+0.5
2,989,388	+		Shew_2532	0.52	-0.5
2,989,396	-		Shew_2532	0.53	-0.2
2,989,453	-		Shew_2532	0.60	-1.1
2,989,463	-		Shew_2532	0.61	+0.3
2,989,463	-		Shew_2532	0.61	+0.2
2,989,548	+		Shew_2532	0.72	+0.3
2,989,548	+		Shew_2532	0.72	+0.1
2,989,548	+		Shew_2532	0.72	-0.7
2,989,556	-		Shew_2532	0.73	-0.0
2,989,652	-		Shew_2532	0.85	-0.3
2,989,670	+		Shew_2532	0.87	-0.1
2,989,699	+				-0.1
2,989,707	-				+0.3
2,989,897	+				+0.4
2,990,049	-				-0.6
2,990,417	+		Shew_2533	0.28	+1.3
2,990,425	-		Shew_2533	0.29	-0.3
2,990,458	+		Shew_2533	0.31	+0.6
2,990,487	+		Shew_2533	0.33	-0.0
2,990,487	+		Shew_2533	0.33	-0.0
2,990,495	-		Shew_2533	0.34	+0.7
2,990,697	-		Shew_2533	0.49	-0.0
2,990,704	+		Shew_2533	0.49	-0.2
2,990,707	-		Shew_2533	0.49	-0.8
2,990,707	-		Shew_2533	0.49	-0.5
2,990,707	-		Shew_2533	0.49	+0.8
2,990,707	-		Shew_2533	0.49	-1.4