Strain Fitness in Shewanella loihica PV-4 around Shew_1689

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
1,941,930	+		Shew_1688	0.82	-2.9
1,942,089	+		Shew_1688	0.89	-2.1
1,942,097	-		Shew_1688	0.90	-2.5
1,942,286	-				-2.5
1,942,831	+		Shew_1689	0.20	-0.2
1,943,096	-		Shew_1689	0.53	-2.1
1,943,241	-		Shew_1689	0.70	-0.9
1,943,453	-				+1.0
1,943,527	-				-0.1
1,943,547	+				+0.0
1,943,555	-				-1.3
1,943,555	-				+0.2
1,943,555	-				-1.2
1,943,637	+				+0.5
1,943,675	-				-1.0
1,944,195	+				+0.3
1,944,195	+				-0.2
1,944,443	-				+0.7
1,944,443	-				+0.4
1,944,452	+				+0.9