Strain Fitness in Shewanella loihica PV-4 around Shew_1533

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
1,757,147	+		Shew_1532	0.53	-1.0
1,757,157	+		Shew_1532	0.53	-1.3
1,757,160	-		Shew_1532	0.53	+0.1
1,757,443	+		Shew_1532	0.70	+0.7
1,757,691	+		Shew_1532	0.84	-0.5
1,757,964	-				-0.3
1,758,232	+				+1.8
1,758,422	+		Shew_1533	0.17	+0.7
1,758,632	-		Shew_1533	0.28	-1.0
1,759,228	+		Shew_1533	0.58	+0.8
1,759,228	+		Shew_1533	0.58	-0.1
1,759,228	+		Shew_1533	0.58	+0.4
1,759,228	+		Shew_1533	0.58	+0.3
1,759,228	+		Shew_1533	0.58	+1.8
1,759,228	+		Shew_1533	0.58	+0.3
1,759,236	-		Shew_1533	0.59	-0.9
1,759,236	-		Shew_1533	0.59	-0.1
1,759,236	-		Shew_1533	0.59	-0.0
1,759,236	-		Shew_1533	0.59	-0.4
1,759,236	-		Shew_1533	0.59	+0.5
1,759,236	-		Shew_1533	0.59	-1.1
1,759,400	+		Shew_1533	0.67	-0.1
1,759,400	+		Shew_1533	0.67	-1.8
1,759,415	+		Shew_1533	0.68	-0.2
1,759,434	-		Shew_1533	0.69	+0.1
1,759,501	+		Shew_1533	0.72	+1.0
1,759,509	-		Shew_1533	0.73	+0.3
1,759,661	+		Shew_1533	0.80	-0.0
1,759,661	+		Shew_1533	0.80	-1.2
1,759,705	-		Shew_1533	0.83	+0.3
1,759,924	-				+0.2
1,760,018	+				-1.3
1,760,436	-				+0.8
1,760,584	-		Shew_1534	0.11	-0.0
1,760,625	+		Shew_1534	0.12	+0.1
1,760,633	-		Shew_1534	0.12	+0.2
1,760,694	-		Shew_1534	0.14	+1.2