Strain Fitness in Shewanella loihica PV-4 around Shew_1420

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
1,633,246	+		Shew_1419	0.27	+0.6
1,633,578	+		Shew_1419	0.64	+0.4
1,633,648	+		Shew_1419	0.71	-0.7
1,633,648	+		Shew_1419	0.71	-0.9
1,633,648	+		Shew_1419	0.71	-0.2
1,633,656	-		Shew_1419	0.72	+1.7
1,633,656	-		Shew_1419	0.72	+3.2
1,633,707	-		Shew_1419	0.78	-1.6
1,633,756	-		Shew_1419	0.84	-2.7
1,633,770	+		Shew_1419	0.85	+0.5
1,633,833	+				-0.8
1,634,178	+		Shew_1420	0.13	-0.7
1,634,254	-		Shew_1420	0.23	+0.9
1,634,290	+		Shew_1420	0.28	+0.8
1,634,609	+		Shew_1420	0.71	-0.1
1,634,609	+		Shew_1420	0.71	+0.1
1,634,609	+		Shew_1420	0.71	+0.5
1,634,609	+		Shew_1420	0.71	-0.5
1,634,617	-		Shew_1420	0.72	+0.6
1,634,617	-		Shew_1420	0.72	-0.1
1,634,617	-		Shew_1420	0.72	-0.6
1,634,622	+		Shew_1420	0.72	+0.6
1,634,680	-		Shew_1420	0.80	+0.3
1,634,687	-		Shew_1420	0.81	+0.6
1,634,797	-				-0.5
1,634,798	-				-0.4
1,634,830	-				-0.8
1,634,837	+				-0.3
1,634,882	+				-0.1
1,634,886	+				+0.4
1,634,887	+				+0.1
1,634,887	+				+0.0
1,634,887	+				+0.4
1,634,887	+				-0.5
1,634,887	+				-0.5
1,634,887	+				+0.8
1,634,887	+				+0.1
1,634,887	+				+1.4
1,634,895	-				+0.7
1,634,895	-				-1.3
1,634,895	-				+0.2
1,634,895	-				-1.8
1,634,895	-				-0.8
1,634,918	+				-0.2
1,634,926	-				+0.6
1,634,926	-				-0.2
1,634,961	+				-0.1
1,634,970	-				-0.5
1,634,988	+				+2.1
1,635,024	+				-0.6
1,635,024	+				+0.3
1,635,032	-				-0.1
1,635,032	-				-0.5
1,635,112	+				-0.9
1,635,214	+		Shew_1421	0.15	-0.3
1,635,214	+		Shew_1421	0.15	+0.2
1,635,214	+		Shew_1421	0.15	+0.5
1,635,222	-		Shew_1421	0.17	-1.8
1,635,222	-		Shew_1421	0.17	+1.1
1,635,269	-		Shew_1421	0.24	+0.3
1,635,310	-		Shew_1421	0.30	+0.3
1,635,310	-		Shew_1421	0.30	-1.3
1,635,310	-		Shew_1421	0.30	+0.4
1,635,310	-		Shew_1421	0.30	+0.5
1,635,313	+		Shew_1421	0.30	-0.3
1,635,320	+		Shew_1421	0.31	+0.4
1,635,328	-		Shew_1421	0.32	+0.8
1,635,388	-		Shew_1421	0.41	-0.1
1,635,410	+		Shew_1421	0.45	-0.1
1,635,410	+		Shew_1421	0.45	-0.9
1,635,410	+		Shew_1421	0.45	-0.1
1,635,410	+		Shew_1421	0.45	-2.3
1,635,410	+		Shew_1421	0.45	-0.3
1,635,410	+		Shew_1421	0.45	-0.2
1,635,410	+		Shew_1421	0.45	-0.3
1,635,410	+		Shew_1421	0.45	-0.7
1,635,410	+		Shew_1421	0.45	+0.4
1,635,410	+		Shew_1421	0.45	+0.1
1,635,410	+		Shew_1421	0.45	-0.5
1,635,410	+		Shew_1421	0.45	-0.6
1,635,410	+		Shew_1421	0.45	-0.3
1,635,410	+		Shew_1421	0.45	-2.3
1,635,410	+		Shew_1421	0.45	+0.2
1,635,410	+		Shew_1421	0.45	+0.7
1,635,410	+		Shew_1421	0.45	-0.0
1,635,410	+		Shew_1421	0.45	-1.1
1,635,410	+		Shew_1421	0.45	+0.0
1,635,410	+		Shew_1421	0.45	-0.1
1,635,410	+		Shew_1421	0.45	+0.5
1,635,410	+		Shew_1421	0.45	-0.0
1,635,410	+		Shew_1421	0.45	+0.3
1,635,410	+		Shew_1421	0.45	-0.2
1,635,410	+		Shew_1421	0.45	+0.5
1,635,410	+		Shew_1421	0.45	+0.2
1,635,410	+		Shew_1421	0.45	+0.6
1,635,410	+		Shew_1421	0.45	-0.8
1,635,418	-		Shew_1421	0.46	-2.1
1,635,418	+		Shew_1421	0.46	+0.3
1,635,418	-		Shew_1421	0.46	+1.9
1,635,418	-		Shew_1421	0.46	+0.4
1,635,418	-		Shew_1421	0.46	+0.7
1,635,418	-		Shew_1421	0.46	+0.4
1,635,418	-		Shew_1421	0.46	+0.2
1,635,418	-		Shew_1421	0.46	-2.3
1,635,418	-		Shew_1421	0.46	-0.4
1,635,418	-		Shew_1421	0.46	-0.2
1,635,418	-		Shew_1421	0.46	+0.6
1,635,418	-		Shew_1421	0.46	+1.1
1,635,418	-		Shew_1421	0.46	-0.2
1,635,418	-		Shew_1421	0.46	-0.4
1,635,418	-		Shew_1421	0.46	-1.7
1,635,418	-		Shew_1421	0.46	+0.3
1,635,418	-		Shew_1421	0.46	+0.3
1,635,418	-		Shew_1421	0.46	-0.3
1,635,418	-		Shew_1421	0.46	+0.9
1,635,418	-		Shew_1421	0.46	+0.4
1,635,418	-		Shew_1421	0.46	+0.9
1,635,418	-		Shew_1421	0.46	+0.3
1,635,418	-		Shew_1421	0.46	+0.6
1,635,418	-		Shew_1421	0.46	+0.3
1,635,418	-		Shew_1421	0.46	-0.1
1,635,418	-		Shew_1421	0.46	-0.3
1,635,418	-		Shew_1421	0.46	+0.1
1,635,418	-		Shew_1421	0.46	+0.5
1,635,418	-		Shew_1421	0.46	-0.0
1,635,418	-		Shew_1421	0.46	+0.2
1,635,418	-		Shew_1421	0.46	-2.1
1,635,418	-		Shew_1421	0.46	-1.9
1,635,418	-		Shew_1421	0.46	+0.0
1,635,418	-		Shew_1421	0.46	-0.2
1,635,418	-		Shew_1421	0.46	+0.3
1,635,418	-		Shew_1421	0.46	+0.9
1,635,420	+		Shew_1421	0.46	-0.5
1,635,420	+		Shew_1421	0.46	+0.6
1,635,420	+		Shew_1421	0.46	-0.2
1,635,420	+		Shew_1421	0.46	+1.4
1,635,420	+		Shew_1421	0.46	-1.7
1,635,420	+		Shew_1421	0.46	+0.1
1,635,420	+		Shew_1421	0.46	+0.3
1,635,420	+		Shew_1421	0.46	+0.3
1,635,420	+		Shew_1421	0.46	+0.4
1,635,421	+		Shew_1421	0.46	-0.1
1,635,421	+		Shew_1421	0.46	+0.8
1,635,428	-		Shew_1421	0.47	-0.2
1,635,428	+		Shew_1421	0.47	+0.3
1,635,428	-		Shew_1421	0.47	+1.5
1,635,428	-		Shew_1421	0.47	-0.2
1,635,428	-		Shew_1421	0.47	+0.4
1,635,428	-		Shew_1421	0.47	+1.1
1,635,429	-		Shew_1421	0.48	+0.0
1,635,433	+		Shew_1421	0.48	+0.2
1,635,433	+		Shew_1421	0.48	-0.3
1,635,433	+		Shew_1421	0.48	+0.5
1,635,433	+		Shew_1421	0.48	-0.6
1,635,433	+		Shew_1421	0.48	+0.4
1,635,433	+		Shew_1421	0.48	+1.9
1,635,433	+		Shew_1421	0.48	-0.1
1,635,433	+		Shew_1421	0.48	-2.7
1,635,438	+		Shew_1421	0.49	+2.5
1,635,441	-		Shew_1421	0.49	+0.1
1,635,441	-		Shew_1421	0.49	-1.0
1,635,441	-		Shew_1421	0.49	+0.6
1,635,448	-		Shew_1421	0.50	-0.4
1,635,529	+		Shew_1421	0.62	-0.5
1,635,534	+		Shew_1421	0.63	-0.7
1,635,535	+		Shew_1421	0.63	+0.3
1,635,535	+		Shew_1421	0.63	-0.1
1,635,535	+		Shew_1421	0.63	+1.1
1,635,542	+		Shew_1421	0.64	+0.4
1,635,543	-		Shew_1421	0.65	+0.4
1,635,543	-		Shew_1421	0.65	+0.8
1,635,543	-		Shew_1421	0.65	+0.7
1,635,548	+		Shew_1421	0.65	+1.0
1,635,550	-		Shew_1421	0.66	+0.6
1,635,555	-		Shew_1421	0.66	+0.6
1,635,574	-		Shew_1421	0.69	-0.8
1,635,575	-		Shew_1421	0.69	+0.6
1,635,616	+		Shew_1421	0.75	+0.1
1,635,616	+		Shew_1421	0.75	-0.7
1,635,630	+		Shew_1421	0.78	-0.2
1,635,793	+				+0.7