Strain Fitness in Shewanella loihica PV-4 around Shew_1418

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
1,631,189	+		Shew_1417	0.28	+0.0
1,631,202	+		Shew_1417	0.29	+0.3
1,631,280	+		Shew_1417	0.36	+1.1
1,631,360	+		Shew_1417	0.44	+1.3
1,631,388	-		Shew_1417	0.47	+0.8
1,631,390	-		Shew_1417	0.47	+2.4
1,631,396	+		Shew_1417	0.48	+1.1
1,631,403	-		Shew_1417	0.48	-0.1
1,631,426	-		Shew_1417	0.50	+4.2
1,631,426	-		Shew_1417	0.50	+2.2
1,631,550	-		Shew_1417	0.62	+1.9
1,631,562	+		Shew_1417	0.63	+1.3
1,631,569	+		Shew_1417	0.64	+0.8
1,631,569	+		Shew_1417	0.64	+0.7
1,631,577	-		Shew_1417	0.65	+2.7
1,631,642	-		Shew_1417	0.71	+1.1
1,631,803	-		Shew_1417	0.86	+0.2
1,631,884	+				+0.3
1,631,971	+				+0.4
1,631,979	-				+0.9
1,632,044	+				-0.0
1,632,046	+				+0.3
1,632,046	+				+1.9
1,632,046	+				-0.2
1,632,054	-				+0.4
1,632,054	-				-0.2
1,632,059	+				+0.6
1,632,067	-		Shew_1418	0.10	-0.7
1,632,080	+		Shew_1418	0.12	+0.5
1,632,228	-		Shew_1418	0.28	-0.1
1,632,409	+		Shew_1418	0.47	+0.5
1,632,412	-		Shew_1418	0.48	+0.5
1,632,412	-		Shew_1418	0.48	-0.3
1,632,417	-		Shew_1418	0.48	+0.9
1,632,417	-		Shew_1418	0.48	+1.9
1,632,467	+		Shew_1418	0.54	+0.3
1,632,756	+		Shew_1418	0.85	-0.1
1,632,797	-		Shew_1418	0.90	+0.4
1,632,974	+				+0.2
1,632,982	-				-0.3
1,633,044	+				+0.1
1,633,044	+				+0.1
1,633,044	+				-0.0
1,633,050	-				-0.0
1,633,052	-				+0.4
1,633,052	-				+1.4
1,633,052	-				-0.2
1,633,052	-				-0.5
1,633,052	-				+0.3
1,633,052	-				+0.6
1,633,067	+				+0.6
1,633,070	-				+1.1
1,633,246	+		Shew_1419	0.27	+0.6
1,633,578	+		Shew_1419	0.64	+0.4
1,633,648	+		Shew_1419	0.71	-0.7
1,633,648	+		Shew_1419	0.71	-0.9
1,633,648	+		Shew_1419	0.71	-0.2
1,633,656	-		Shew_1419	0.72	+1.7
1,633,656	-		Shew_1419	0.72	+3.2
1,633,707	-		Shew_1419	0.78	-1.6
1,633,756	-		Shew_1419	0.84	-2.7
1,633,770	+		Shew_1419	0.85	+0.5
1,633,833	+				-0.8