Strain Fitness in Shewanella loihica PV-4 around Shew_1404

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
1,615,723	+				+0.7
1,615,780	+				-1.1
1,615,800	-				-1.7
1,615,853	+				-4.7
1,615,862	+		Shew_1403	0.10	-4.7
1,616,035	+		Shew_1403	0.30	-1.1
1,616,130	+		Shew_1403	0.41	-0.4
1,616,137	+		Shew_1403	0.42	-2.3
1,616,137	+		Shew_1403	0.42	-3.5
1,616,137	+		Shew_1403	0.42	-4.4
1,616,167	+		Shew_1403	0.45	-1.1
1,616,314	+		Shew_1403	0.62	-3.9
1,616,344	+		Shew_1403	0.66	-2.6
1,616,410	+		Shew_1403	0.73	-3.2
1,616,410	+		Shew_1403	0.73	-2.3
1,616,410	+		Shew_1403	0.73	-1.1
1,616,410	+		Shew_1403	0.73	-2.8
1,616,418	-		Shew_1403	0.74	+0.9
1,616,488	+		Shew_1403	0.82	-1.7
1,616,606	+				-0.4
1,616,614	-				+0.9
1,616,753	+		Shew_1404	0.20	-1.6
1,616,753	+		Shew_1404	0.20	-0.7
1,616,753	+		Shew_1404	0.20	-2.3
1,616,753	+		Shew_1404	0.20	-2.1
1,616,753	+		Shew_1404	0.20	-3.4
1,616,781	+		Shew_1404	0.25	-1.1
1,616,781	+		Shew_1404	0.25	-2.0
1,616,861	+		Shew_1404	0.40	-0.4
1,616,940	+		Shew_1404	0.54	-3.4
1,616,940	+		Shew_1404	0.54	-1.4
1,616,940	+		Shew_1404	0.54	-2.8
1,616,940	+		Shew_1404	0.54	-0.9
1,616,940	+		Shew_1404	0.54	-2.9
1,616,940	+		Shew_1404	0.54	-2.8
1,616,941	+		Shew_1404	0.55	-1.4
1,616,945	+		Shew_1404	0.55	-4.0
1,616,948	-		Shew_1404	0.56	+0.9
1,616,972	+		Shew_1404	0.60	-3.3
1,616,972	+		Shew_1404	0.60	-2.7
1,616,972	+		Shew_1404	0.60	-4.4
1,616,977	+		Shew_1404	0.61	-1.9
1,616,989	+		Shew_1404	0.63	+0.9
1,617,013	+		Shew_1404	0.68	-3.1
1,617,063	+		Shew_1404	0.77	+0.9
1,617,063	+		Shew_1404	0.77	-2.5
1,617,063	+		Shew_1404	0.77	-0.3
1,617,063	+		Shew_1404	0.77	-0.7
1,617,063	+		Shew_1404	0.77	-3.7
1,617,063	+		Shew_1404	0.77	-1.4
1,617,071	+		Shew_1404	0.78	-2.6
1,617,078	+		Shew_1404	0.80	-4.6
1,617,157	+				-2.0
1,617,163	-				+2.5
1,617,165	-				-0.7
1,617,211	+				+0.2
1,617,217	+				+0.9
1,617,217	+				-0.2
1,617,217	+				+1.4
1,617,217	+				-0.5
1,617,217	+				-0.5
1,617,223	+				-0.0
1,617,225	-				+0.9
1,617,376	+		Shew_1405	0.18	+0.2
1,617,455	+		Shew_1405	0.25	+1.5
1,617,455	+		Shew_1405	0.25	+0.5
1,617,556	+		Shew_1405	0.35	+0.4
1,617,559	+		Shew_1405	0.35	-0.3
1,617,634	+		Shew_1405	0.42	-0.4
1,617,634	+		Shew_1405	0.42	-0.7
1,617,634	+		Shew_1405	0.42	+0.3
1,617,634	+		Shew_1405	0.42	-0.2
1,617,634	+		Shew_1405	0.42	+0.1
1,617,634	+		Shew_1405	0.42	+1.3
1,617,634	+		Shew_1405	0.42	+0.2
1,617,642	-		Shew_1405	0.43	+1.5
1,617,642	-		Shew_1405	0.43	-0.1
1,617,692	+		Shew_1405	0.48	-2.0
1,617,699	+		Shew_1405	0.48	-0.1
1,617,751	+		Shew_1405	0.53	+0.3
1,617,751	+		Shew_1405	0.53	-0.8
1,617,751	+		Shew_1405	0.53	+1.0
1,617,767	-		Shew_1405	0.55	+0.0
1,617,774	+		Shew_1405	0.55	+0.5
1,617,777	-		Shew_1405	0.56	+1.3
1,617,964	+		Shew_1405	0.73	+0.6
1,617,995	+		Shew_1405	0.76	+0.5
1,618,002	+		Shew_1405	0.77	-0.5
1,618,003	+		Shew_1405	0.77	-0.2
1,618,003	+		Shew_1405	0.77	-0.5
1,618,003	+		Shew_1405	0.77	+0.5
1,618,007	+		Shew_1405	0.77	+0.2
1,618,007	+		Shew_1405	0.77	-0.2
1,618,010	-		Shew_1405	0.78	-0.1
1,618,014	+		Shew_1405	0.78	-0.1
1,618,014	+		Shew_1405	0.78	+0.3
1,618,014	+		Shew_1405	0.78	+0.3
1,618,072	+		Shew_1405	0.83	-0.4
1,618,082	+		Shew_1405	0.84	+1.6