Strain Fitness in Shewanella loihica PV-4 around Shew_1400

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
1,612,470	+				-2.1
1,612,515	+				-1.4
1,612,517	-				-1.7
1,613,111	+		Shew_1400	0.52	-1.4
1,613,162	+		Shew_1400	0.58	-3.0
1,613,572	-				-1.0
1,613,598	-				-0.7
1,613,638	+				-0.2
1,613,646	+				+0.4
1,613,646	+				+0.1
1,613,646	+				-0.3
1,613,654	-				-1.0
1,613,654	-				-1.7
1,613,654	-				-1.9
1,613,670	-				-0.1
1,613,861	+				+0.8
1,614,020	+		Shew_1401	0.21	+0.7
1,614,020	+		Shew_1401	0.21	-0.8
1,614,040	+		Shew_1401	0.23	+0.3
1,614,040	+		Shew_1401	0.23	+0.2
1,614,102	-		Shew_1401	0.28	+1.0
1,614,110	-		Shew_1401	0.29	+1.9
1,614,196	+		Shew_1401	0.37	+0.3
1,614,340	+		Shew_1401	0.50	+0.3
1,614,342	+		Shew_1401	0.50	-0.3
1,614,342	+		Shew_1401	0.50	-0.3
1,614,342	+		Shew_1401	0.50	+0.0
1,614,342	+		Shew_1401	0.50	+1.0
1,614,448	+		Shew_1401	0.60	+2.3
1,614,448	+		Shew_1401	0.60	+0.6
1,614,456	-		Shew_1401	0.60	+0.9
1,614,466	-		Shew_1401	0.61	+0.6
1,614,466	-		Shew_1401	0.61	-1.4
1,614,520	+		Shew_1401	0.66	+0.7
1,614,520	+		Shew_1401	0.66	-0.9
1,614,520	+		Shew_1401	0.66	-0.5