Strain Fitness in Shewanella loihica PV-4 around Shew_0974

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
1,118,054	+		Shew_0973	0.32	+0.9
1,118,112	+		Shew_0973	0.37	+2.1
1,118,129	+		Shew_0973	0.38	+2.3
1,118,199	-		Shew_0973	0.45	+1.6
1,118,232	+		Shew_0973	0.48	+0.6
1,118,707	+				+0.8
1,118,707	+				+1.0
1,118,757	+				+0.1
1,118,816	+				+0.3
1,119,146	+		Shew_0974	0.21	+0.4
1,119,322	+		Shew_0974	0.37	+0.5
1,119,324	-		Shew_0974	0.37	+0.3
1,119,663	+		Shew_0974	0.67	+0.2
1,119,761	+		Shew_0974	0.75	+2.5
1,119,949	+				-0.5
1,120,091	+				-0.8
1,120,394	+		Shew_0975	0.38	+0.7
1,120,412	-		Shew_0975	0.40	+1.3
1,120,586	-		Shew_0975	0.59	+0.3
1,120,586	-		Shew_0975	0.59	+0.5
1,120,687	-		Shew_0975	0.70	+0.3
1,120,803	-		Shew_0975	0.83	-0.9
1,120,803	-		Shew_0975	0.83	+0.3
1,120,939	-				-0.3