Strain Fitness in Shewanella loihica PV-4 around Shew_0442

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
491,166	+				-1.2
491,231	+				-1.2
491,246	+		Shew_0441	0.11	-1.1
491,254	-		Shew_0441	0.12	-0.2
491,254	-		Shew_0441	0.12	-1.5
491,254	-		Shew_0441	0.12	-1.0
491,254	-		Shew_0441	0.12	-1.3
491,254	-		Shew_0441	0.12	-1.1
491,292	+		Shew_0441	0.16	-1.2
491,300	-		Shew_0441	0.17	-1.2
491,478	-		Shew_0441	0.38	-1.7
491,559	+		Shew_0441	0.48	-1.1
491,566	-		Shew_0441	0.49	+0.1
491,621	+		Shew_0441	0.55	-1.3
491,660	+		Shew_0441	0.60	-0.7
491,793	+		Shew_0441	0.76	-1.1
491,843	-		Shew_0441	0.82	-0.8
491,843	-		Shew_0441	0.82	-1.9
492,252	-		Shew_0442	0.14	-0.3
492,401	+		Shew_0442	0.31	-0.6
492,409	-		Shew_0442	0.32	-0.1
492,460	+		Shew_0442	0.37	+0.1
492,468	-		Shew_0442	0.38	-0.7
492,655	+		Shew_0442	0.59	-0.7
492,751	+		Shew_0442	0.70	-0.1
492,870	+		Shew_0442	0.83	-0.3
493,004	+				+0.5
493,005	-				+0.0
493,014	+				+0.4
493,014	+				-0.0
493,014	+				+0.2
493,014	+				+0.1
493,014	+				-0.3
493,022	-				+0.6
493,022	-				+0.2
493,022	-				-0.6
493,022	-				+0.0
493,022	-				+0.8
493,022	-				+0.3
493,122	-				-0.8
493,187	+				-0.1
493,234	-				-1.1
493,302	+				+0.2
493,406	-		Shew_0443	0.13	-0.1
493,413	-		Shew_0443	0.13	+0.0
493,415	+		Shew_0443	0.13	+0.8
493,415	+		Shew_0443	0.13	+0.5
493,423	-		Shew_0443	0.14	+0.7
493,590	+		Shew_0443	0.23	+0.3
493,774	-		Shew_0443	0.34	+0.2
493,975	+		Shew_0443	0.46	+0.1