Experiment: Vancomycin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0248 and Shew_0249 are separated by 455 nucleotides Shew_0249 and Shew_0250 are separated by 10 nucleotides
Shew_0248: Shew_0248 - GCN5-related N-acetyltransferase (RefSeq), at 267,039 to 267,596
_0248
Shew_0249: Shew_0249 - GCN5-related N-acetyltransferase (RefSeq), at 268,052 to 268,594
_0249
Shew_0250: Shew_0250 - MerR family transcriptional regulator (RefSeq), at 268,605 to 269,783
_0250
Position (kb) 268
269 Strain fitness (log2 ratio) -1
0
1
2
3 at 267.192 kb on - strand, within Shew_0248 at 267.285 kb on - strand, within Shew_0248 at 267.287 kb on + strand, within Shew_0248 at 267.295 kb on - strand, within Shew_0248 at 267.295 kb on - strand, within Shew_0248 at 267.369 kb on + strand, within Shew_0248 at 267.371 kb on - strand, within Shew_0248 at 267.418 kb on + strand, within Shew_0248 at 267.592 kb on - strand at 267.607 kb on - strand at 267.913 kb on + strand at 267.932 kb on - strand at 268.026 kb on + strand at 268.110 kb on - strand, within Shew_0249 at 268.171 kb on - strand, within Shew_0249 at 268.342 kb on - strand, within Shew_0249 at 268.507 kb on + strand, within Shew_0249 at 268.718 kb on - strand at 268.740 kb on + strand, within Shew_0250 at 268.751 kb on - strand, within Shew_0250 at 268.826 kb on + strand, within Shew_0250 at 268.996 kb on - strand, within Shew_0250 at 269.180 kb on + strand, within Shew_0250 at 269.334 kb on + strand, within Shew_0250 at 269.413 kb on - strand, within Shew_0250 at 269.423 kb on - strand, within Shew_0250 at 269.423 kb on - strand, within Shew_0250
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.0625 mg/ml remove 267,192 - Shew_0248 0.27 -0.9 267,285 - Shew_0248 0.44 +0.3 267,287 + Shew_0248 0.44 +3.1 267,295 - Shew_0248 0.46 -0.3 267,295 - Shew_0248 0.46 -0.0 267,369 + Shew_0248 0.59 +0.8 267,371 - Shew_0248 0.59 -0.3 267,418 + Shew_0248 0.68 -1.0 267,592 - -0.2 267,607 - +0.1 267,913 + +0.5 267,932 - -0.5 268,026 + +0.4 268,110 - Shew_0249 0.11 +0.3 268,171 - Shew_0249 0.22 +1.0 268,342 - Shew_0249 0.53 -0.2 268,507 + Shew_0249 0.84 +0.8 268,718 - +0.6 268,740 + Shew_0250 0.11 +0.2 268,751 - Shew_0250 0.12 -0.8 268,826 + Shew_0250 0.19 +0.4 268,996 - Shew_0250 0.33 +0.6 269,180 + Shew_0250 0.49 +0.4 269,334 + Shew_0250 0.62 +0.4 269,413 - Shew_0250 0.69 +1.0 269,423 - Shew_0250 0.69 -0.3 269,423 - Shew_0250 0.69 +0.4
Or see this region's nucleotide sequence