Strain Fitness in Shewanella loihica PV-4 around Shew_0137

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
146,168	+		Shew_0136	0.26	-0.2
146,187	+		Shew_0136	0.28	+0.9
146,359	-		Shew_0136	0.43	+1.5
146,374	-		Shew_0136	0.45	+0.1
146,374	-		Shew_0136	0.45	+0.5
146,407	-		Shew_0136	0.48	-0.3
146,449	+		Shew_0136	0.51	+0.5
146,498	-		Shew_0136	0.56	+0.8
146,723	+		Shew_0136	0.76	+0.7
146,724	-		Shew_0136	0.76	+0.6
146,736	+		Shew_0136	0.77	+1.5
147,052	+				-0.0
147,052	+				-0.1
147,052	+				-0.2
147,052	+				-0.4
147,052	+				+0.0
147,052	+				-0.4
147,052	+				-0.3
147,052	+				-0.8
147,052	+				+0.1
147,052	+				-0.3
147,052	+				+0.7
147,052	+				-0.6
147,060	-				-0.5
147,060	-				-0.4
147,060	-				-0.2
147,060	-				-0.2
147,060	-				-1.0
147,060	-				-0.4
147,060	-				-0.4
147,060	-				-0.3
147,060	-				+0.4
147,060	-				-0.7
147,060	-				+0.4
147,060	-				-0.7
147,255	-		Shew_0137	0.21	-1.0
147,334	-		Shew_0137	0.34	-1.4
147,427	-		Shew_0137	0.49	-1.6
147,474	+		Shew_0137	0.56	-1.6
147,515	-		Shew_0137	0.63	-1.3
147,548	-		Shew_0137	0.68	-2.4
147,721	+				+0.6
147,807	+				+0.5
147,921	+				-0.3
147,921	+				-0.8
147,928	-				-0.1
147,928	-				-0.1
147,947	-		Shew_0138	0.11	+0.2
148,047	+		Shew_0138	0.20	+0.7
148,177	-		Shew_0138	0.32	-0.2
148,177	-		Shew_0138	0.32	-0.0
148,214	-		Shew_0138	0.36	+0.3
148,484	-		Shew_0138	0.60	-0.4
148,499	-		Shew_0138	0.62	-0.3
148,532	+		Shew_0138	0.65	-0.3