Strain Fitness in Shewanella oneidensis MR-1 around SO_A0180

Experiment: Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.25 mg/ml
64,560	+				+0.6
64,599	-				+0.3
64,600	+				+0.5
64,613	-				+0.3
64,619	+				+0.4
64,619	+				-0.8
64,619	+				-0.4
64,627	-				+0.3
64,627	-				+0.4
64,684	-				+0.3
64,730	+				+0.2
64,730	+				+0.5
64,738	-				+0.2
64,738	-				-0.3
64,743	+				-0.0
64,751	-				-0.4
64,780	+				-0.3
64,787	-				+0.2
64,787	-				-0.3
64,787	-				-0.9
64,812	+				-1.1
64,855	+				+0.2
64,863	-				+0.1
64,865	-				+0.2
64,865	-				-0.5
64,882	+				-0.5
64,900	+				-0.4
64,912	-				-0.3
64,939	+				+0.6
64,955	-				+0.5
64,963	-				-0.4
65,011	+				+0.0
65,011	+				+0.0
65,019	-				-0.8
65,019	-				+1.4
65,064	+				+0.2
65,065	-				+0.5
65,065	-				+0.4
65,096	-		SO_A0180	0.10	+0.9
65,125	+		SO_A0180	0.16	+0.1
65,125	+		SO_A0180	0.16	+0.3
65,125	+		SO_A0180	0.16	-0.1
65,132	-		SO_A0180	0.17	+0.3
65,133	-		SO_A0180	0.17	+0.2
65,133	-		SO_A0180	0.17	+0.6
65,133	-		SO_A0180	0.17	+0.4
65,138	-		SO_A0180	0.18	-0.2
65,178	+		SO_A0180	0.26	+0.7
65,179	+		SO_A0180	0.26	+0.8
65,186	-		SO_A0180	0.27	+0.8
65,190	+		SO_A0180	0.28	+0.2
65,204	-		SO_A0180	0.31	+0.2
65,209	-		SO_A0180	0.32	+0.4
65,209	-		SO_A0180	0.32	+0.7
65,221	+		SO_A0180	0.34	+0.2
65,229	-		SO_A0180	0.35	+0.3
65,231	+		SO_A0180	0.36	+1.0
65,257	+		SO_A0180	0.41	-0.4
65,264	+		SO_A0180	0.42	+0.2
65,294	+		SO_A0180	0.48	-0.1
65,294	+		SO_A0180	0.48	+1.4
65,302	-		SO_A0180	0.49	+0.3
65,302	-		SO_A0180	0.49	+0.9
65,309	+		SO_A0180	0.51	+0.7
65,357	+		SO_A0180	0.60	+0.9
65,367	+		SO_A0180	0.62	+0.6
65,375	+		SO_A0180	0.63	-0.5
65,407	-		SO_A0180	0.69	-0.2
65,421	+		SO_A0180	0.72	-0.1
65,421	+		SO_A0180	0.72	-0.2
65,421	+		SO_A0180	0.72	+0.0
65,429	-		SO_A0180	0.73	-0.7
65,451	-		SO_A0180	0.77	-0.5
65,451	-		SO_A0180	0.77	-0.6
65,461	-		SO_A0180	0.79	+0.4
65,461	-		SO_A0180	0.79	+1.6
65,521	+				+0.2
65,521	+				+1.0
65,524	-				-0.2
65,526	+				+0.0
65,526	-				+0.1
65,529	-				-0.1
65,529	-				-0.4
65,531	-				+0.4
65,532	-				-0.0
65,537	-				-0.4
65,537	-				+0.1
65,595	+				+0.3
65,608	-				+0.2
65,614	+				-1.1
65,614	+				+1.2
65,622	+				-0.3
65,622	-				+1.0
65,622	-				+1.0
65,622	-				-0.5
65,624	+				-0.8
65,624	+				+0.2
65,631	-				-0.3
65,632	-				+0.7
65,632	-				+0.2
65,676	+				+0.2
65,676	+				-1.0
65,685	+				-0.8
65,690	+				-0.2
66,278	-		SOA0085	0.68	+0.3
66,511	+				+1.4
66,542	+				+0.0
66,564	+				-0.0