Strain Fitness in Shewanella oneidensis MR-1 around SO3369

Experiment: Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.25 mg/ml
3,510,790	+	mutY	SO3368	0.12	-0.9
3,510,901	-	mutY	SO3368	0.22	-0.3
3,510,925	+	mutY	SO3368	0.24	-0.8
3,510,978	+	mutY	SO3368	0.29	-0.8
3,511,004	+	mutY	SO3368	0.32	-0.9
3,511,004	+	mutY	SO3368	0.32	+0.0
3,511,004	+	mutY	SO3368	0.32	+0.8
3,511,004	+	mutY	SO3368	0.32	-0.1
3,511,012	-	mutY	SO3368	0.32	-0.2
3,511,012	-	mutY	SO3368	0.32	+0.4
3,511,012	-	mutY	SO3368	0.32	+0.3
3,511,012	-	mutY	SO3368	0.32	-0.9
3,511,031	+	mutY	SO3368	0.34	+0.0
3,511,109	+	mutY	SO3368	0.41	-0.4
3,511,122	-	mutY	SO3368	0.42	-0.1
3,511,297	-	mutY	SO3368	0.58	-0.4
3,511,372	+	mutY	SO3368	0.65	-0.2
3,511,470	+	mutY	SO3368	0.74	-0.7
3,511,596	+	mutY	SO3368	0.86	-0.5
3,511,882	-		SO3369	0.43	-2.7
3,511,904	+		SO3369	0.51	-2.6
3,511,992	+		SO3369	0.82	-3.5
3,512,048	+				-0.9
3,512,056	-				+1.0
3,512,056	-				-1.9
3,512,157	-				+0.3
3,512,163	+				+1.3
3,512,163	+				-0.6
3,512,170	+				+0.3
3,512,249	+		SO3370	0.22	+1.0
3,512,257	-		SO3370	0.23	-0.5
3,512,263	+		SO3370	0.24	+0.3
3,512,402	+		SO3370	0.49	+1.4
3,512,428	-		SO3370	0.53	-0.8
3,512,495	+		SO3370	0.65	+0.1
3,512,495	+		SO3370	0.65	+0.2
3,512,509	-		SO3370	0.67	-0.5
3,512,509	-		SO3370	0.67	+1.2
3,512,560	+		SO3370	0.76	-1.5
3,512,568	-		SO3370	0.77	-0.2
3,512,568	-		SO3370	0.77	-0.8
3,512,568	-		SO3370	0.77	-0.9
3,512,568	-		SO3370	0.77	-0.6
3,512,568	-		SO3370	0.77	-0.5
3,512,587	+		SO3370	0.81	-1.1
3,512,671	-				+0.1
3,512,732	-				-0.1
3,512,734	+				-1.0
3,512,734	+				+0.5
3,512,742	-				+0.1
3,512,786	-		SO3371	0.15	-0.5
3,512,804	+		SO3371	0.18	+1.1
3,512,804	+		SO3371	0.18	+0.4
3,512,825	+		SO3371	0.22	+0.4
3,512,871	-		SO3371	0.31	+0.6
3,512,904	-		SO3371	0.37	+0.1
3,512,986	-		SO3371	0.51	-1.1
3,513,038	-		SO3371	0.61	-0.4