Strain Fitness in Shewanella oneidensis MR-1 around SO2965

Experiment: Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.25 mg/ml
3,097,841	-				-0.1
3,098,349	-		SO2964	0.46	-0.8
3,098,402	+		SO2964	0.52	-0.1
3,098,485	+		SO2964	0.62	-0.3
3,098,543	-		SO2964	0.69	-0.1
3,098,618	+		SO2964	0.78	-0.6
3,098,618	+		SO2964	0.78	-0.5
3,098,618	+		SO2964	0.78	+0.2
3,098,626	-		SO2964	0.78	-0.6
3,098,626	-		SO2964	0.78	-0.4
3,098,626	-		SO2964	0.78	+0.0
3,098,626	-		SO2964	0.78	+0.2
3,098,626	-		SO2964	0.78	-0.1
3,098,646	-		SO2964	0.81	-0.5
3,098,743	+				+0.4
3,098,743	+				-0.3
3,098,805	+				+0.2
3,098,899	+				-0.8
3,098,899	+				+0.4
3,098,972	+		SO2965	0.12	-2.5
3,098,974	+		SO2965	0.12	-0.4
3,099,017	-		SO2965	0.15	+0.2
3,099,057	+		SO2965	0.18	+0.3
3,099,057	+		SO2965	0.18	+0.3
3,099,059	+		SO2965	0.18	-0.8
3,099,065	-		SO2965	0.19	-1.1
3,099,088	+		SO2965	0.21	+0.9
3,099,096	-		SO2965	0.21	-0.1
3,099,103	+		SO2965	0.22	-0.1
3,099,103	+		SO2965	0.22	-0.4
3,099,111	-		SO2965	0.22	+0.0
3,099,111	-		SO2965	0.22	-0.1
3,099,111	-		SO2965	0.22	-0.5
3,099,148	+		SO2965	0.25	-0.7
3,099,156	-		SO2965	0.26	+0.2
3,099,200	-		SO2965	0.29	+0.2
3,099,259	+		SO2965	0.34	+0.5
3,099,327	-		SO2965	0.39	-0.8
3,099,337	+		SO2965	0.40	+0.1
3,099,517	+		SO2965	0.54	-0.7
3,099,533	-		SO2965	0.55	-0.5
3,099,670	-		SO2965	0.66	+0.1
3,099,759	+		SO2965	0.72	+0.2
3,099,809	-		SO2965	0.76	+0.0
3,099,924	-		SO2965	0.85	+0.6
3,099,926	+		SO2965	0.85	+0.1
3,099,934	-		SO2965	0.86	+0.4
3,100,024	+				-0.5
3,100,031	+				-0.9
3,100,335	+				+0.1
3,100,343	-				-1.8
3,100,473	-		SO2967	0.11	+0.2
3,100,518	+		SO2967	0.14	-0.4
3,100,520	+		SO2967	0.14	-0.1
3,100,528	-		SO2967	0.14	+0.3
3,100,537	+		SO2967	0.15	+0.2
3,100,545	-		SO2967	0.15	+0.5
3,100,577	-		SO2967	0.17	+2.1
3,100,646	+		SO2967	0.21	-0.5
3,100,693	-		SO2967	0.24	-0.5
3,100,710	+		SO2967	0.25	+0.0
3,100,710	+		SO2967	0.25	-0.6
3,100,713	+		SO2967	0.25	+0.0
3,100,713	+		SO2967	0.25	-0.4
3,100,718	-		SO2967	0.25	+0.0
3,100,728	+		SO2967	0.26	+0.4
3,100,728	+		SO2967	0.26	-0.7
3,100,751	-		SO2967	0.27	-0.8
3,100,819	+		SO2967	0.31	-0.6
3,100,819	+		SO2967	0.31	+0.2