Strain Fitness in Shewanella oneidensis MR-1 around SO2785

Experiment: Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.25 mg/ml
2,905,080	-		SO_2784	0.59	-0.0
2,905,235	+		SO_2784	0.75	-0.1
2,905,374	+		SO_2784	0.89	-1.9
2,905,382	-				-0.8
2,905,382	-				-1.1
2,905,419	-				-0.2
2,905,447	+				-0.3
2,905,512	-				-0.4
2,905,512	-				-0.4
2,907,871	+	rne	SO2785	0.55	-2.8
2,907,908	+	rne	SO2785	0.56	-1.6
2,907,996	+	rne	SO2785	0.59	-3.8
2,908,128	+	rne	SO2785	0.63	-2.1
2,908,144	-	rne	SO2785	0.63	-1.5
2,908,368	-	rne	SO2785	0.70	-2.3
2,908,438	-	rne	SO2785	0.72	-2.6
2,908,438	-	rne	SO2785	0.72	-2.0
2,908,519	-	rne	SO2785	0.75	-2.1
2,908,522	+	rne	SO2785	0.75	-4.2
2,908,591	+	rne	SO2785	0.77	-0.9
2,908,597	+	rne	SO2785	0.77	-1.6
2,908,602	+	rne	SO2785	0.77	-1.7
2,908,610	-	rne	SO2785	0.78	-1.1
2,908,610	-	rne	SO2785	0.78	-2.7
2,908,648	+	rne	SO2785	0.79	-0.4
2,908,656	-	rne	SO2785	0.79	-2.0
2,908,739	+	rne	SO2785	0.82	-1.2
2,908,810	-	rne	SO2785	0.84	-1.1
2,908,942	+	rne	SO2785	0.88	-0.4
2,908,950	-	rne	SO2785	0.88	-1.1
2,909,073	+				-1.0
2,909,144	-				-0.4
2,909,146	+				-1.3
2,909,154	-				-0.4
2,909,497	+		SO_2786	0.15	-0.4
2,909,519	+		SO_2786	0.26	+0.8
2,909,550	-		SO_2786	0.40	+0.1
2,909,596	+		SO_2786	0.62	-0.2