Strain Fitness in Shewanella oneidensis MR-1 around SO1798

Experiment: Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.25 mg/ml
1,886,243	+	lon	SO1796	0.90	-3.6
1,886,460	-				-2.3
1,886,541	-				-1.2
1,886,549	+				-0.1
1,887,465	+	ppiD	SO1798	0.12	-3.4
1,887,790	-	ppiD	SO1798	0.30	-1.8
1,887,860	-	ppiD	SO1798	0.33	-1.2
1,887,940	-	ppiD	SO1798	0.38	-1.5
1,888,343	+	ppiD	SO1798	0.59	-0.4
1,888,559	-	ppiD	SO1798	0.71	-1.8
1,888,564	-	ppiD	SO1798	0.71	-1.5
1,888,603	+	ppiD	SO1798	0.73	-2.1
1,888,801	+	ppiD	SO1798	0.84	-2.1
1,888,806	-	ppiD	SO1798	0.84	-1.1
1,888,866	+	ppiD	SO1798	0.87	-1.9
1,888,883	+	ppiD	SO1798	0.88	-1.9
1,888,890	+	ppiD	SO1798	0.89	-0.6
1,888,914	-	ppiD	SO1798	0.90	-1.8
1,889,104	+				+0.5
1,889,187	+				-0.4
1,889,378	+		SO_1799	0.49	-0.2
1,889,378	+		SO_1799	0.49	+0.2
1,889,386	-		SO_1799	0.53	-0.1
1,889,526	-				+0.6