Strain Fitness in Shewanella oneidensis MR-1 around SO1457

Experiment: Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.25 mg/ml
1,513,540	+				-0.0
1,513,543	-				+0.2
1,513,547	+				-0.3
1,513,583	+				-0.1
1,513,591	-				-0.1
1,513,632	+				-0.4
1,513,728	+				+0.6
1,513,728	+				-0.1
1,513,728	+				-0.2
1,513,728	+				-0.1
1,513,736	-				-1.9
1,513,747	-				-1.1
1,513,862	-				-2.0
1,513,992	+				+0.3
1,514,009	-				-2.7
1,514,011	+				-0.9
1,514,011	+				+0.1
1,514,011	-				-0.7
1,514,019	-				-2.8
1,514,019	-				-1.4
1,514,019	-				-0.7
1,514,019	-				-2.1
1,514,047	-				-0.8
1,514,098	+				-0.0
1,514,108	+				-0.1
1,514,115	-				-0.7
1,514,116	-				+0.1
1,514,116	-				-1.2
1,514,127	+				+0.2
1,514,143	-				-0.4
1,514,154	+				-0.5
1,514,220	-				-0.0
1,514,220	-				-1.9
1,514,290	-				-0.1
1,514,302	-				-0.1
1,514,316	+				+0.2
1,514,344	+				-0.2
1,514,344	-				-0.7
1,514,396	+				-0.6
1,514,396	+				-0.3
1,514,404	+				+0.1
1,514,409	-				-1.1
1,514,409	-				+0.1
1,514,429	-				-0.7
1,514,431	+				-1.4
1,514,482	+		SO1457	0.12	-1.3
1,514,485	-		SO1457	0.12	-1.3
1,514,490	-		SO1457	0.12	-0.5
1,514,667	-		SO1457	0.21	-0.7
1,514,796	+		SO1457	0.27	+0.6
1,514,804	-		SO1457	0.27	-0.6
1,514,804	-		SO1457	0.27	-0.6
1,514,942	-		SO1457	0.34	-0.1
1,515,191	+		SO1457	0.46	-1.8
1,515,198	+		SO1457	0.47	+0.1
1,515,199	-		SO1457	0.47	-0.9
1,515,199	-		SO1457	0.47	-1.3
1,515,206	-		SO1457	0.47	-0.6
1,515,219	+		SO1457	0.48	+0.5
1,515,351	+		SO1457	0.54	-1.1
1,515,477	-		SO1457	0.60	-1.0
1,515,625	-		SO1457	0.67	+0.2
1,515,718	+		SO1457	0.72	-0.4
1,515,924	-		SO1457	0.82	-0.9
1,516,100	+				-0.4
1,516,116	+				+1.0
1,516,154	+				-0.7
1,516,154	+				-0.9
1,516,327	+				-1.7
1,516,335	-				-0.8
1,516,348	+				-0.2
1,516,382	-				+1.1
1,516,393	+				-0.7
1,516,401	-				-0.4
1,516,526	+		SO1458	0.18	-1.2
1,516,592	+		SO1458	0.23	-1.1
1,516,646	+		SO1458	0.27	-1.4
1,516,801	+		SO1458	0.39	-3.7
1,516,801	+		SO1458	0.39	-1.0
1,516,801	+		SO1458	0.39	-2.7
1,516,809	-		SO1458	0.40	+0.1
1,516,860	-		SO1458	0.44	-1.2
1,517,055	-		SO1458	0.59	+0.2
1,517,070	-		SO1458	0.60	-0.8
1,517,120	-		SO1458	0.64	+0.5
1,517,125	+		SO1458	0.64	-1.3
1,517,133	-		SO1458	0.65	-1.1
1,517,265	+		SO1458	0.75	-0.6
1,517,265	+		SO1458	0.75	-0.5
1,517,265	+		SO1458	0.75	-2.4