Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0766

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_0765 and ipk are separated by 112 nucleotidesipk and Shewana3_0767 are separated by 1 nucleotidesShewana3_0767 and hemA are separated by 254 nucleotides Shewana3_0765: Shewana3_0765 - ribose-phosphate pyrophosphokinase (RefSeq), at 887,536 to 888,483 _0765 Shewana3_0766: ipk - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (RefSeq), at 888,596 to 889,450 ipk Shewana3_0767: Shewana3_0767 - outer membrane lipoprotein LolB (RefSeq), at 889,452 to 890,096 _0767 Shewana3_0768: hemA - glutamyl-tRNA reductase (RefSeq), at 890,351 to 891,601 hemA Position (kb) 888 889 890Strain fitness (log2 ratio) -1 0 1 2at 889.480 kb on - strandat 890.314 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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889,480 - -1.3
890,314 + +2.2

Or see this region's nucleotide sequence