Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4306

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_4305 and Shewana3_4306 are separated by 942 nucleotidesShewana3_4306 and Shewana3_4307 are separated by 84 nucleotides Shewana3_4305: Shewana3_4305 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 192,443 to 193,609 _4305 Shewana3_4306: Shewana3_4306 - IS4 family transposase (RefSeq), at 194,552 to 195,232 _4306 Shewana3_4307: Shewana3_4307 - transposase Tn3 family protein (RefSeq), at 195,317 to 198,304 _4307 Position (kb) 194 195 196Strain fitness (log2 ratio) -2 -1 0 1 2at 193.572 kb on - strandat 193.572 kb on - strandat 193.584 kb on - strandat 193.730 kb on + strandat 193.730 kb on + strandat 193.730 kb on + strandat 193.738 kb on - strandat 193.772 kb on + strandat 193.820 kb on + strandat 193.848 kb on - strandat 193.848 kb on - strandat 193.859 kb on + strandat 193.859 kb on + strandat 193.869 kb on - strandat 193.883 kb on - strandat 193.954 kb on + strandat 193.955 kb on + strandat 194.009 kb on - strandat 194.045 kb on + strandat 194.045 kb on + strandat 194.045 kb on + strandat 194.045 kb on + strandat 194.053 kb on - strandat 194.053 kb on - strandat 194.069 kb on + strandat 194.078 kb on - strandat 194.100 kb on - strandat 194.145 kb on - strandat 194.169 kb on + strandat 194.177 kb on - strandat 194.179 kb on + strandat 194.179 kb on + strandat 194.187 kb on - strandat 194.192 kb on - strandat 194.210 kb on - strandat 194.212 kb on - strandat 194.212 kb on - strandat 194.291 kb on + strandat 194.446 kb on + strandat 194.446 kb on - strandat 194.469 kb on - strandat 194.492 kb on + strandat 194.493 kb on - strandat 195.378 kb on - strandat 195.497 kb on + strandat 195.850 kb on + strand, within Shewana3_4307at 195.990 kb on - strand, within Shewana3_4307at 195.990 kb on - strand, within Shewana3_4307at 195.993 kb on + strand, within Shewana3_4307at 196.212 kb on + strand, within Shewana3_4307at 196.220 kb on - strand, within Shewana3_4307at 196.220 kb on - strand, within Shewana3_4307

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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193,572 - +1.1
193,572 - -1.6
193,584 - -0.9
193,730 + +0.0
193,730 + -1.4
193,730 + +0.6
193,738 - +0.5
193,772 + +1.7
193,820 + +0.2
193,848 - +0.3
193,848 - -0.1
193,859 + +0.1
193,859 + -1.7
193,869 - +0.4
193,883 - +0.7
193,954 + -0.7
193,955 + +1.8
194,009 - -0.5
194,045 + +0.8
194,045 + +0.4
194,045 + -1.8
194,045 + +1.1
194,053 - -0.7
194,053 - +0.2
194,069 + +0.4
194,078 - -1.0
194,100 - +0.5
194,145 - -0.6
194,169 + +0.1
194,177 - +0.3
194,179 + +0.4
194,179 + -1.9
194,187 - -0.5
194,192 - +1.1
194,210 - -0.3
194,212 - +1.0
194,212 - -0.7
194,291 + +0.6
194,446 + -1.3
194,446 - +1.4
194,469 - -0.4
194,492 + -0.9
194,493 - +0.2
195,378 - -0.4
195,497 + +0.8
195,850 + Shewana3_4307 0.18 +0.8
195,990 - Shewana3_4307 0.23 -0.6
195,990 - Shewana3_4307 0.23 -0.3
195,993 + Shewana3_4307 0.23 -0.2
196,212 + Shewana3_4307 0.30 -1.3
196,220 - Shewana3_4307 0.30 -0.1
196,220 - Shewana3_4307 0.30 +0.2

Or see this region's nucleotide sequence