Strain Fitness in Shewanella loihica PV-4 around Shew_3505

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,191,198	+				+0.7
4,191,396	+		Shew_3504	0.22	+0.2
4,191,404	-		Shew_3504	0.23	+0.3
4,191,471	-		Shew_3504	0.33	+0.4
4,191,471	-		Shew_3504	0.33	+0.7
4,191,783	+		Shew_3504	0.80	-0.5
4,191,791	-		Shew_3504	0.81	+0.3
4,191,791	-		Shew_3504	0.81	-0.0
4,191,939	+				+0.2
4,191,959	+				-0.0
4,191,959	+				+0.2
4,192,031	+				+0.2
4,192,339	+		Shew_3505	0.30	+1.1
4,192,339	+		Shew_3505	0.30	+0.1
4,192,387	+		Shew_3505	0.34	-0.7
4,192,660	+		Shew_3505	0.59	+0.1
4,192,756	-		Shew_3505	0.68	-0.1
4,192,756	-		Shew_3505	0.68	-0.4
4,192,788	+		Shew_3505	0.71	-0.0
4,192,803	-		Shew_3505	0.72	-0.0
4,192,818	-		Shew_3505	0.73	-0.2
4,192,940	+		Shew_3505	0.85	-0.6
4,193,188	+		Shew_3506	0.12	-0.0
4,193,196	-		Shew_3506	0.14	+0.6
4,193,196	-		Shew_3506	0.14	+1.8
4,193,231	-		Shew_3506	0.19	+0.0
4,193,717	+				-0.0
4,193,954	-				-1.6