Strain Fitness in Shewanella loihica PV-4 around Shew_3454

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShew_3453 and Shew_3454 are separated by 0 nucleotidesShew_3454 and Shew_3455 overlap by 8 nucleotides Shew_3453: Shew_3453 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (RefSeq), at 4,135,191 to 4,136,285 _3453 Shew_3454: Shew_3454 - cell division protein FtsW (RefSeq), at 4,136,286 to 4,137,500 _3454 Shew_3455: Shew_3455 - UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq), at 4,137,493 to 4,138,824 _3455 Position (kb) 4136 4137 4138Strain fitness (log2 ratio) -2 -1 0 1at 4136.306 kb on - strandat 4136.306 kb on - strandat 4136.306 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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4,136,306 - -2.1
4,136,306 - +0.2
4,136,306 - -0.4

Or see this region's nucleotide sequence