Strain Fitness in Shewanella loihica PV-4 around Shew_3203

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,820,254	-		Shew_3202	0.66	-0.2
3,820,441	+		Shew_3202	0.74	+0.5
3,820,583	-		Shew_3202	0.79	+0.2
3,820,886	+				+0.3
3,820,891	-				+1.1
3,820,912	+				+0.3
3,821,174	+				-0.0
3,821,274	-		Shew_3203	0.13	+0.4
3,821,435	+		Shew_3203	0.26	+0.9
3,821,458	-		Shew_3203	0.28	+1.7
3,821,574	+		Shew_3203	0.37	-0.3
3,821,574	+		Shew_3203	0.37	-0.1
3,821,686	+		Shew_3203	0.46	+1.1
3,821,689	-		Shew_3203	0.46	-0.5
3,821,820	-		Shew_3203	0.57	+0.3
3,822,047	+		Shew_3203	0.75	-0.1
3,822,055	-		Shew_3203	0.76	-0.6
3,822,290	+				-0.1
3,822,693	-		Shew_3204	0.53	-2.1
3,822,711	+		Shew_3204	0.56	+0.9
3,822,719	-		Shew_3204	0.57	-0.9
3,822,865	-		Shew_3204	0.82	-2.1