Strain Fitness in Shewanella loihica PV-4 around Shew_3061
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 3,633,121 | + | Shew_3060 | 0.72 | -0.7 | |
| 3,633,738 | - | +0.7 | |||
| 3,633,852 | - | -0.2 | |||
| 3,634,017 | - | -0.9 | |||
| 3,634,065 | + | -0.8 | |||
| 3,634,121 | - | -0.2 | |||
| 3,634,880 | - | -1.0 | |||
| 3,634,942 | - | +0.1 | |||
| 3,635,017 | - | -0.9 | |||
| 3,635,121 | - | +0.9 | |||
| 3,635,214 | + | +0.7 | |||
| 3,635,418 | + | +2.0 | |||
| 3,635,513 | - | +0.2 | |||
| 3,635,620 | + | +0.3 | |||
| 3,635,667 | + | +1.1 | |||
| 3,635,782 | - | Shew_3062 | 0.10 | +0.2 |
Or see this region's nucleotide sequence