Strain Fitness in Shewanella loihica PV-4 around Shew_2633

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShew_2631 and Shew_2632 are separated by 81 nucleotidesShew_2632 and pyrH are separated by 35 nucleotidespyrH and tsf are separated by 133 nucleotides Shew_2631: Shew_2631 - undecaprenyl diphosphate synthase (RefSeq), at 3,106,357 to 3,107,148 _2631 Shew_2632: Shew_2632 - ribosome recycling factor (RefSeq), at 3,107,230 to 3,107,787 _2632 Shew_2633: pyrH - uridylate kinase (RefSeq), at 3,107,823 to 3,108,566 pyrH Shew_2634: tsf - elongation factor Ts (RefSeq), at 3,108,700 to 3,109,548 tsf Position (kb) 3107 3108 3109Strain fitness (log2 ratio) -1 0 1at 3107.192 kb on - strandat 3107.192 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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3,107,192 - -0.2
3,107,192 - +0.8

Or see this region's nucleotide sequence