Strain Fitness in Shewanella loihica PV-4 around Shew_2480

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,914,057	-		Shew_2479	0.23	+0.1
2,914,330	+		Shew_2479	0.50	+0.2
2,914,407	-		Shew_2479	0.58	+0.8
2,914,538	+		Shew_2479	0.71	+0.6
2,914,554	+		Shew_2479	0.72	+0.1
2,914,554	+		Shew_2479	0.72	+1.7
2,914,562	-		Shew_2479	0.73	+0.6
2,914,563	-		Shew_2479	0.73	+0.4
2,914,650	-		Shew_2479	0.82	-0.1
2,914,938	+				+0.4
2,914,949	+				-1.3
2,915,227	-		Shew_2480	0.13	+1.1
2,915,474	+		Shew_2480	0.22	-1.0
2,915,743	+		Shew_2480	0.32	-0.8
2,915,762	-		Shew_2480	0.33	-0.2
2,915,772	+		Shew_2480	0.33	+1.7
2,915,808	+		Shew_2480	0.35	-1.1
2,915,995	+		Shew_2480	0.42	+0.0
2,915,995	+		Shew_2480	0.42	+0.1
2,916,140	-		Shew_2480	0.47	-0.4
2,916,146	-		Shew_2480	0.48	-1.1
2,916,223	-		Shew_2480	0.50	-0.2
2,917,116	-		Shew_2480	0.84	+1.3
2,917,116	-		Shew_2480	0.84	-1.0
2,917,221	+		Shew_2480	0.88	-0.2
2,917,221	+		Shew_2480	0.88	-2.5
2,918,100	+				+0.2
2,918,108	-				+1.3
2,918,109	-				-2.5
2,918,159	-				-1.0
2,918,178	-				+0.6
2,918,255	-				-0.3
2,918,257	+				+0.6
2,918,257	+				-0.4
2,918,369	+				-0.1
2,918,444	+				-2.0
2,918,485	-				-0.9
2,918,499	+		Shew_2481	0.10	-2.0