Strain Fitness in Shewanella loihica PV-4 around Shew_2433
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 2,859,360 | + | Shew_2432 | 0.44 | +1.3 | |
| 2,859,368 | - | Shew_2432 | 0.45 | +1.7 | |
| 2,859,688 | - | Shew_2432 | 0.64 | +0.7 | |
| 2,859,876 | - | Shew_2432 | 0.76 | -1.1 | |
| 2,860,113 | - | -0.8 | |||
| 2,860,120 | - | +0.3 | |||
| 2,861,144 | + | Shew_2434 | 0.33 | +0.3 | |
| 2,861,321 | + | Shew_2434 | 0.58 | -0.7 | |
| 2,861,573 | + | +0.2 | |||
| 2,861,581 | - | +0.2 | |||
| 2,861,639 | + | -0.1 |
Or see this region's nucleotide sequence