Strain Fitness in Shewanella loihica PV-4 around Shew_2318

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShew_2317 and Shew_2318 are separated by 77 nucleotidesShew_2318 and Shew_2319 are separated by 196 nucleotides Shew_2317: Shew_2317 - cysteine desulfurase IscS (RefSeq), at 2,712,521 to 2,713,735 _2317 Shew_2318: Shew_2318 - BadM/Rrf2 family transcriptional regulator (RefSeq), at 2,713,813 to 2,714,274 _2318 Shew_2319: Shew_2319 - serine O-acetyltransferase (RefSeq), at 2,714,471 to 2,715,292 _2319 Position (kb) 2713 2714 2715Strain fitness (log2 ratio) -1 0 1at 2714.336 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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2,714,336 + +0.4

Or see this region's nucleotide sequence