Strain Fitness in Shewanella loihica PV-4 around Shew_2294

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,680,966	+		Shew_2293	0.46	+0.2
2,681,239	+		Shew_2293	0.63	+0.7
2,681,247	-		Shew_2293	0.63	+0.5
2,681,462	+		Shew_2293	0.77	-0.0
2,681,544	-		Shew_2293	0.82	-0.1
2,681,739	-				+0.4
2,681,743	+				-0.3
2,682,422	+		Shew_2294	0.21	-0.2
2,682,630	+		Shew_2294	0.31	+0.4
2,682,688	-		Shew_2294	0.33	+0.5
2,682,716	+		Shew_2294	0.35	-0.9
2,683,005	+		Shew_2294	0.48	+1.8
2,683,052	-		Shew_2294	0.50	+1.2
2,683,108	+		Shew_2294	0.52	+0.9
2,683,431	-		Shew_2294	0.67	+1.4
2,683,801	+		Shew_2294	0.84	+0.4
2,683,804	-		Shew_2294	0.84	+1.4
2,683,872	-		Shew_2294	0.87	+1.5
2,683,908	+		Shew_2294	0.89	-1.0
2,684,021	+				+0.3
2,684,042	+				+0.1
2,684,044	+				-1.0
2,684,060	+				-0.0
2,684,060	+				+1.7
2,684,065	+				-0.3
2,684,068	-				+0.2
2,684,068	-				-0.2
2,684,068	-				+0.5
2,684,068	-				-0.7
2,684,068	-				+0.4
2,684,079	+				-0.3
2,684,132	-				-0.3
2,684,182	-				+1.1
2,684,209	+				-2.2
2,684,209	+				-1.3
2,684,217	-				+0.5
2,684,217	-				-0.7
2,684,217	-				+0.1
2,684,217	-				-0.4
2,684,217	-				+0.4
2,684,231	-				-0.5
2,684,331	-				-0.8
2,684,331	-				+0.1
2,684,339	+				-0.1
2,684,346	-				+0.1
2,684,346	-				+0.0
2,684,370	+				-0.4
2,684,371	+				+0.4
2,684,379	-				-0.2
2,684,380	+				+0.2
2,684,380	+				-0.6
2,684,380	+				+0.6
2,684,380	+				+2.1
2,684,380	+				+1.0
2,684,380	+				-0.7
2,684,380	+				+0.1
2,684,380	+				+0.6
2,684,380	+				+0.6
2,684,380	+				+0.7
2,684,380	+				+1.5
2,684,380	+				-0.1
2,684,380	+				+0.4
2,684,380	+				+0.3
2,684,380	+				+1.5
2,684,380	+				-0.3
2,684,380	+				+1.5
2,684,380	+				-1.1
2,684,380	+				+0.2
2,684,380	+				-0.1
2,684,380	+				-0.5
2,684,380	+				+0.5
2,684,380	+				+0.9
2,684,380	+				+0.9
2,684,380	+				-0.3
2,684,380	+				+0.4
2,684,380	+				+0.5
2,684,380	+				-1.2
2,684,380	+				+3.1
2,684,380	+				+0.5
2,684,380	+				+0.0
2,684,380	+				-0.4
2,684,380	+				-0.9
2,684,388	-				-0.2
2,684,388	-				-0.3
2,684,388	-				+0.5
2,684,388	-				-0.1
2,684,388	-				+0.7
2,684,388	-				-0.1
2,684,388	-				+0.1
2,684,388	-				-0.1
2,684,388	-				+0.0
2,684,388	-				-0.5
2,684,388	-				+0.7
2,684,388	-				+0.4
2,684,388	-				+0.5
2,684,388	-				+0.3
2,684,388	-				-1.5
2,684,388	-				-0.8
2,684,388	-				+0.3
2,684,388	-				-0.1
2,684,388	-				-0.8
2,684,388	-				-0.7
2,684,388	-				+0.5
2,684,388	-				-0.6
2,684,388	-				-0.6
2,684,388	-				-1.0
2,684,388	-				-0.7
2,684,388	-				+0.9
2,684,394	+				+0.0
2,684,410	-				+0.2
2,684,411	-				-0.4
2,684,503	+				+0.3
2,684,604	+		Shew_2295	0.15	+0.0
2,684,612	-		Shew_2295	0.16	+0.6
2,684,834	+		Shew_2295	0.42	-0.5
2,684,842	-		Shew_2295	0.43	+0.1
2,684,842	-		Shew_2295	0.43	+0.1
2,684,842	-		Shew_2295	0.43	+0.3
2,684,847	+		Shew_2295	0.43	-0.0
2,684,969	+		Shew_2295	0.57	-0.9
2,684,969	+		Shew_2295	0.57	+0.0
2,684,977	-		Shew_2295	0.58	-0.2
2,684,977	-		Shew_2295	0.58	+0.9
2,684,977	-		Shew_2295	0.58	-0.6