Strain Fitness in Shewanella loihica PV-4 around Shew_1754

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,005,412	-		Shew_1753	0.10	-0.8
2,005,414	+		Shew_1753	0.11	+1.4
2,005,414	+		Shew_1753	0.11	+1.0
2,005,414	+		Shew_1753	0.11	+0.5
2,005,414	+		Shew_1753	0.11	-0.4
2,005,414	+		Shew_1753	0.11	+0.3
2,005,414	+		Shew_1753	0.11	+0.3
2,005,414	+		Shew_1753	0.11	-0.4
2,005,422	+		Shew_1753	0.12	+2.7
2,005,422	+		Shew_1753	0.12	+0.1
2,005,422	-		Shew_1753	0.12	+0.2
2,005,422	+		Shew_1753	0.12	-0.1
2,005,445	-		Shew_1753	0.17	+0.2
2,005,585	+		Shew_1753	0.43	-0.6
2,005,603	-		Shew_1753	0.47	-1.2
2,005,630	+		Shew_1753	0.52	-1.7
2,005,638	-		Shew_1753	0.53	-0.4
2,005,638	-		Shew_1753	0.53	-0.4
2,005,638	-		Shew_1753	0.53	-0.5
2,005,709	-		Shew_1753	0.67	+0.4
2,005,709	-		Shew_1753	0.67	-2.8
2,005,841	+				+0.7
2,005,983	-				+1.3
2,005,983	-				-0.3
2,005,994	-				+0.3
2,006,040	+				+0.2
2,006,063	-				-1.2
2,006,063	-				+0.0
2,006,064	-				-0.1
2,006,260	+				+0.2
2,006,298	+				-1.6
2,006,364	+				+0.7
2,006,364	+				+0.1
2,006,387	+				-0.8
2,006,490	-		Shew_1754	0.54	-0.7
2,006,556	-				-0.3
2,006,968	-				+0.4
2,007,120	+		Shew_1756	0.18	-0.2
2,007,195	-		Shew_1756	0.25	+0.1