Strain Fitness in Shewanella loihica PV-4 around Shew_1549

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,776,673	-		Shew_1548	0.26	+0.8
1,776,727	-		Shew_1548	0.33	+0.8
1,776,820	+		Shew_1548	0.44	-0.5
1,776,939	-		Shew_1548	0.59	-0.8
1,779,986	-				-0.4
1,780,235	+		Shew_1550	0.12	+0.1
1,780,329	-		Shew_1550	0.15	+0.7
1,780,502	+		Shew_1550	0.20	+1.9
1,780,516	-		Shew_1550	0.21	+0.5
1,780,595	-		Shew_1550	0.23	+0.7
1,780,681	-		Shew_1550	0.26	+0.9
1,780,681	-		Shew_1550	0.26	-1.0