Strain Fitness in Shewanella loihica PV-4 around Shew_1408

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,619,734	+				+0.6
1,619,740	-				-2.0
1,619,769	+				+0.2
1,619,777	-				+1.8
1,619,907	+				-0.7
1,619,961	+				+0.1
1,619,961	+				-0.8
1,619,961	+				-0.2
1,619,969	-				-1.2
1,619,992	+				+0.7
1,619,992	+				+0.7
1,620,013	+		Shew_1407	0.12	+0.9
1,620,013	+		Shew_1407	0.12	+0.5
1,620,013	+		Shew_1407	0.12	-0.1
1,620,128	+		Shew_1407	0.28	+0.7
1,620,128	+		Shew_1407	0.28	+0.9
1,620,128	+		Shew_1407	0.28	+0.6
1,620,128	+		Shew_1407	0.28	+1.8
1,620,132	+		Shew_1407	0.28	+0.3
1,620,138	+		Shew_1407	0.29	+1.1
1,620,138	+		Shew_1407	0.29	-0.1
1,620,139	+		Shew_1407	0.29	+0.3
1,620,139	+		Shew_1407	0.29	+0.2
1,620,150	-		Shew_1407	0.31	-0.6
1,620,151	-		Shew_1407	0.31	+2.0
1,620,213	-		Shew_1407	0.39	+1.0
1,620,239	+		Shew_1407	0.43	+0.6
1,620,255	+		Shew_1407	0.45	+1.7
1,620,309	+		Shew_1407	0.52	+1.4
1,620,314	+		Shew_1407	0.53	+0.5
1,620,370	+		Shew_1407	0.60	+0.4
1,620,412	+		Shew_1407	0.66	+0.6
1,620,412	+		Shew_1407	0.66	+0.2
1,620,419	+		Shew_1407	0.67	+0.6
1,620,420	-		Shew_1407	0.67	-1.2
1,620,420	-		Shew_1407	0.67	+0.5
1,620,439	+		Shew_1407	0.70	+1.6
1,620,446	+		Shew_1407	0.71	+1.8
1,620,605	+				+0.1
1,620,611	+				+1.4