Strain Fitness in Shewanella loihica PV-4 around Shew_0801

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
912,607	+		Shew_0800	0.29	+0.1
912,607	+		Shew_0800	0.29	+0.3
912,625	-		Shew_0800	0.30	+0.2
912,750	+		Shew_0800	0.40	-0.0
912,758	-		Shew_0800	0.41	+0.2
912,803	-		Shew_0800	0.45	-0.4
912,891	-		Shew_0800	0.52	+0.8
913,830	+	rumB	Shew_0801	0.26	-2.0
913,838	-	rumB	Shew_0801	0.27	-0.2
913,838	-	rumB	Shew_0801	0.27	-0.8
913,890	-	rumB	Shew_0801	0.31	-1.0
913,932	-	rumB	Shew_0801	0.35	+0.4
914,003	-	rumB	Shew_0801	0.41	-2.7
914,190	+	rumB	Shew_0801	0.58	-0.9
914,209	+	rumB	Shew_0801	0.59	+1.0
914,308	-	rumB	Shew_0801	0.68	-0.5
915,104	-		Shew_0802	0.23	+0.2
915,498	-		Shew_0802	0.56	-0.6
915,629	-		Shew_0802	0.67	-0.4
915,640	-		Shew_0802	0.68	+0.6