Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0748 and Shew_0749 are separated by 71 nucleotides Shew_0749 and Shew_0750 are separated by 62 nucleotides Shew_0750 and Shew_0751 are separated by 69 nucleotides Shew_0751 and Shew_0752 are separated by 523 nucleotides
Shew_0748: Shew_0748 - acetyltransferase (RefSeq), at 849,062 to 849,622
_0748
Shew_0749: Shew_0749 - hypothetical protein (RefSeq), at 849,694 to 850,038
_0749
Shew_0750: Shew_0750 - hypothetical protein (RefSeq), at 850,101 to 850,538
_0750
Shew_0751: Shew_0751 - S-adenosylmethionine synthetase (RefSeq), at 850,608 to 851,759
_0751
Shew_0752: Shew_0752 - transketolase (RefSeq), at 852,283 to 854,277
_0752
Position (kb) 850
851
852 Strain fitness (log2 ratio) -1
0
1 at 849.617 kb on + strand at 849.775 kb on - strand, within Shew_0749 at 849.838 kb on - strand, within Shew_0749 at 850.103 kb on + strand at 850.111 kb on + strand at 850.119 kb on - strand at 850.189 kb on - strand, within Shew_0750 at 850.431 kb on + strand, within Shew_0750 at 851.889 kb on + strand at 851.994 kb on + strand at 851.994 kb on + strand at 852.028 kb on + strand at 852.032 kb on - strand at 852.038 kb on + strand at 852.038 kb on + strand at 852.043 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 849,617 + +0.0 849,775 - Shew_0749 0.23 -0.2 849,838 - Shew_0749 0.42 -0.1 850,103 + +0.1 850,111 + -0.0 850,119 - +1.1 850,189 - Shew_0750 0.20 +0.0 850,431 + Shew_0750 0.75 +0.8 851,889 + +0.4 851,994 + -0.4 851,994 + +0.1 852,028 + -0.3 852,032 - -0.1 852,038 + +0.1 852,038 + -0.4 852,043 + +0.3
Or see this region's nucleotide sequence