Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0691 and Shew_0692 are separated by 4 nucleotides Shew_0692 and Shew_0693 are separated by 107 nucleotides Shew_0693 and Shew_0694 overlap by 4 nucleotides
Shew_0691: Shew_0691 - hypothetical protein (RefSeq), at 785,061 to 786,194
_0691
Shew_0692: Shew_0692 - hypothetical protein (RefSeq), at 786,199 to 787,119
_0692
Shew_0693: Shew_0693 - hypothetical protein (RefSeq), at 787,227 to 787,514
_0693
Shew_0694: Shew_0694 - hypothetical protein (RefSeq), at 787,511 to 788,452
_0694
Position (kb) 786
787
788 Strain fitness (log2 ratio) -1
0
1 at 785.305 kb on - strand, within Shew_0691 at 785.305 kb on - strand, within Shew_0691 at 785.368 kb on + strand, within Shew_0691 at 785.368 kb on + strand, within Shew_0691 at 785.368 kb on + strand, within Shew_0691 at 785.376 kb on - strand, within Shew_0691 at 785.468 kb on - strand, within Shew_0691 at 785.558 kb on - strand, within Shew_0691 at 785.620 kb on + strand, within Shew_0691 at 785.620 kb on + strand, within Shew_0691 at 785.692 kb on - strand, within Shew_0691 at 785.977 kb on - strand, within Shew_0691 at 786.073 kb on + strand, within Shew_0691 at 786.091 kb on + strand at 786.504 kb on - strand, within Shew_0692 at 786.596 kb on - strand, within Shew_0692 at 786.755 kb on + strand, within Shew_0692 at 786.897 kb on + strand, within Shew_0692 at 787.174 kb on + strand at 787.475 kb on + strand, within Shew_0693 at 787.516 kb on - strand at 787.589 kb on + strand at 787.717 kb on - strand, within Shew_0694 at 787.765 kb on + strand, within Shew_0694 at 787.940 kb on - strand, within Shew_0694 at 788.002 kb on + strand, within Shew_0694
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 785,305 - Shew_0691 0.22 -0.1 785,305 - Shew_0691 0.22 -0.6 785,368 + Shew_0691 0.27 -1.0 785,368 + Shew_0691 0.27 -0.8 785,368 + Shew_0691 0.27 +0.8 785,376 - Shew_0691 0.28 -0.1 785,468 - Shew_0691 0.36 +0.7 785,558 - Shew_0691 0.44 +0.6 785,620 + Shew_0691 0.49 -0.3 785,620 + Shew_0691 0.49 -0.6 785,692 - Shew_0691 0.56 +0.3 785,977 - Shew_0691 0.81 +0.2 786,073 + Shew_0691 0.89 -0.0 786,091 + +0.0 786,504 - Shew_0692 0.33 +0.4 786,596 - Shew_0692 0.43 +0.7 786,755 + Shew_0692 0.60 +0.4 786,897 + Shew_0692 0.76 +1.4 787,174 + +0.5 787,475 + Shew_0693 0.86 -0.6 787,516 - +0.6 787,589 + -0.7 787,717 - Shew_0694 0.22 +0.1 787,765 + Shew_0694 0.27 -0.2 787,940 - Shew_0694 0.46 +0.0 788,002 + Shew_0694 0.52 +0.4
Or see this region's nucleotide sequence