Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0657 and Shew_0658 are separated by 291 nucleotides Shew_0658 and Shew_0659 are separated by 105 nucleotides
Shew_0657: Shew_0657 - putative nitric oxide reductase (subunit B) transmembrane protein (RefSeq), at 745,706 to 747,997
_0657
Shew_0658: Shew_0658 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase (RefSeq), at 748,289 to 749,215
_0658
Shew_0659: Shew_0659 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (RefSeq), at 749,321 to 750,751
_0659
Position (kb) 748
749
750 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 747.443 kb on + strand, within Shew_0657 at 747.484 kb on + strand, within Shew_0657 at 747.719 kb on - strand, within Shew_0657 at 747.751 kb on + strand, within Shew_0657 at 747.934 kb on + strand at 748.029 kb on + strand at 748.215 kb on - strand at 748.820 kb on + strand, within Shew_0658 at 748.946 kb on - strand, within Shew_0658 at 749.400 kb on + strand at 749.639 kb on - strand, within Shew_0659 at 749.832 kb on - strand, within Shew_0659
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 747,443 + Shew_0657 0.76 +0.2 747,484 + Shew_0657 0.78 -0.2 747,719 - Shew_0657 0.88 -2.6 747,751 + Shew_0657 0.89 -0.0 747,934 + +0.0 748,029 + +0.7 748,215 - -0.1 748,820 + Shew_0658 0.57 +4.1 748,946 - Shew_0658 0.71 +0.3 749,400 + -1.1 749,639 - Shew_0659 0.22 -2.1 749,832 - Shew_0659 0.36 -1.3
Or see this region's nucleotide sequence