Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0470 and groES are separated by 227 nucleotides groES and groEL are separated by 56 nucleotides groEL and Shew_0473 are separated by 526 nucleotides
Shew_0470: Shew_0470 - MATE efflux family protein (RefSeq), at 527,511 to 528,878
_0470
Shew_0471: groES - co-chaperonin GroES (RefSeq), at 529,106 to 529,396
groES
Shew_0472: groEL - chaperonin GroEL (RefSeq), at 529,453 to 531,102
groEL
Shew_0473: Shew_0473 - hypothetical protein (RefSeq), at 531,629 to 532,156
_0473
Position (kb) 529
530
531
532 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 528.478 kb on - strand, within Shew_0470 at 528.979 kb on + strand at 531.147 kb on + strand at 531.155 kb on - strand at 531.155 kb on - strand at 531.157 kb on + strand at 531.157 kb on + strand at 531.157 kb on + strand at 531.165 kb on - strand at 531.219 kb on + strand at 531.235 kb on - strand at 531.272 kb on - strand at 531.338 kb on + strand at 531.338 kb on + strand at 531.338 kb on + strand at 531.346 kb on - strand at 531.346 kb on - strand at 531.346 kb on - strand at 531.352 kb on + strand at 531.357 kb on + strand at 531.360 kb on - strand at 531.362 kb on + strand at 531.362 kb on + strand at 531.362 kb on + strand at 531.362 kb on + strand at 531.370 kb on - strand at 531.370 kb on - strand at 531.370 kb on - strand at 531.370 kb on - strand at 531.375 kb on + strand at 531.382 kb on + strand at 531.382 kb on + strand at 531.390 kb on - strand at 531.390 kb on - strand at 531.390 kb on - strand at 531.394 kb on + strand at 531.394 kb on + strand at 531.394 kb on + strand at 531.394 kb on + strand at 531.396 kb on + strand at 531.396 kb on + strand at 531.396 kb on + strand at 531.396 kb on + strand at 531.396 kb on + strand at 531.396 kb on + strand at 531.396 kb on + strand at 531.396 kb on + strand at 531.402 kb on - strand at 531.402 kb on - strand at 531.402 kb on - strand at 531.402 kb on - strand at 531.402 kb on - strand at 531.404 kb on - strand at 531.404 kb on - strand at 531.404 kb on - strand at 531.404 kb on - strand at 531.404 kb on - strand at 531.443 kb on + strand at 531.443 kb on + strand at 531.449 kb on - strand at 531.451 kb on - strand at 531.451 kb on - strand at 531.458 kb on + strand at 531.459 kb on + strand at 531.461 kb on - strand at 531.467 kb on - strand at 531.467 kb on - strand at 531.467 kb on - strand at 531.472 kb on - strand at 531.472 kb on - strand at 531.474 kb on + strand at 531.474 kb on - strand at 531.474 kb on + strand at 531.474 kb on + strand at 531.474 kb on + strand at 531.497 kb on + strand at 531.497 kb on - strand at 531.537 kb on - strand at 531.554 kb on - strand at 531.561 kb on - strand at 531.621 kb on - strand at 531.690 kb on + strand, within Shew_0473 at 531.692 kb on + strand, within Shew_0473 at 531.698 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on - strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on - strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.700 kb on - strand, within Shew_0473 at 531.700 kb on + strand, within Shew_0473 at 531.707 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.708 kb on - strand, within Shew_0473 at 531.714 kb on + strand, within Shew_0473 at 531.723 kb on + strand, within Shew_0473 at 531.802 kb on + strand, within Shew_0473 at 531.802 kb on + strand, within Shew_0473 at 531.807 kb on + strand, within Shew_0473 at 531.808 kb on + strand, within Shew_0473 at 531.810 kb on - strand, within Shew_0473 at 531.810 kb on - strand, within Shew_0473 at 531.820 kb on + strand, within Shew_0473 at 531.824 kb on + strand, within Shew_0473 at 531.827 kb on - strand, within Shew_0473 at 531.832 kb on - strand, within Shew_0473 at 531.869 kb on + strand, within Shew_0473 at 531.918 kb on + strand, within Shew_0473 at 531.921 kb on - strand, within Shew_0473 at 531.926 kb on - strand, within Shew_0473 at 531.980 kb on + strand, within Shew_0473 at 532.050 kb on - strand, within Shew_0473 at 532.061 kb on + strand, within Shew_0473 at 532.071 kb on + strand, within Shew_0473 at 532.071 kb on + strand, within Shew_0473 at 532.078 kb on + strand, within Shew_0473 at 532.086 kb on - strand, within Shew_0473 at 532.086 kb on - strand, within Shew_0473 at 532.087 kb on - strand, within Shew_0473
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 528,478 - Shew_0470 0.71 -2.1 528,979 + +0.7 531,147 + +0.5 531,155 - +0.3 531,155 - -0.3 531,157 + +0.0 531,157 + +0.2 531,157 + +0.3 531,165 - +0.5 531,219 + +0.3 531,235 - +2.1 531,272 - +1.4 531,338 + -0.4 531,338 + -0.2 531,338 + +0.9 531,346 - -1.0 531,346 - +0.9 531,346 - +0.1 531,352 + +0.1 531,357 + -0.7 531,360 - -0.4 531,362 + +0.2 531,362 + +0.2 531,362 + +0.8 531,362 + -0.3 531,370 - +0.7 531,370 - -1.9 531,370 - -0.0 531,370 - -0.2 531,375 + -0.2 531,382 + -0.3 531,382 + -0.1 531,390 - +0.2 531,390 - -0.6 531,390 - +0.1 531,394 + +0.1 531,394 + +0.3 531,394 + -0.7 531,394 + -0.9 531,396 + +0.0 531,396 + +0.8 531,396 + -0.7 531,396 + +1.4 531,396 + -1.3 531,396 + -0.5 531,396 + -0.5 531,396 + +0.3 531,402 - -0.5 531,402 - +0.5 531,402 - +0.8 531,402 - -0.3 531,402 - +0.1 531,404 - -0.3 531,404 - -0.3 531,404 - +0.2 531,404 - +0.6 531,404 - -0.1 531,443 + +0.1 531,443 + +0.5 531,449 - +0.1 531,451 - +0.1 531,451 - -0.9 531,458 + -0.3 531,459 + -0.4 531,461 - +0.3 531,467 - -0.9 531,467 - +0.4 531,467 - +0.2 531,472 - -0.9 531,472 - -0.5 531,474 + +0.7 531,474 - -1.3 531,474 + +0.2 531,474 + -0.3 531,474 + +1.6 531,497 + -1.0 531,497 - -0.4 531,537 - +0.3 531,554 - +0.1 531,561 - +0.6 531,621 - +0.6 531,690 + Shew_0473 0.12 -0.7 531,692 + Shew_0473 0.12 +1.2 531,698 + Shew_0473 0.13 -0.3 531,700 + Shew_0473 0.13 +3.5 531,700 + Shew_0473 0.13 +0.6 531,700 + Shew_0473 0.13 +1.1 531,700 + Shew_0473 0.13 -1.3 531,700 + Shew_0473 0.13 +1.0 531,700 + Shew_0473 0.13 +0.4 531,700 + Shew_0473 0.13 +0.6 531,700 + Shew_0473 0.13 -1.2 531,700 + Shew_0473 0.13 +1.0 531,700 + Shew_0473 0.13 +0.2 531,700 + Shew_0473 0.13 +0.0 531,700 - Shew_0473 0.13 +0.7 531,700 + Shew_0473 0.13 +0.4 531,700 + Shew_0473 0.13 -0.1 531,700 + Shew_0473 0.13 -2.8 531,700 + Shew_0473 0.13 -0.0 531,700 + Shew_0473 0.13 +1.4 531,700 + Shew_0473 0.13 -0.1 531,700 + Shew_0473 0.13 -0.1 531,700 + Shew_0473 0.13 -1.9 531,700 + Shew_0473 0.13 -0.7 531,700 + Shew_0473 0.13 -1.8 531,700 + Shew_0473 0.13 +0.1 531,700 + Shew_0473 0.13 +0.4 531,700 + Shew_0473 0.13 -1.3 531,700 + Shew_0473 0.13 +0.5 531,700 + Shew_0473 0.13 -0.3 531,700 + Shew_0473 0.13 +2.6 531,700 + Shew_0473 0.13 -3.0 531,700 + Shew_0473 0.13 -1.1 531,700 - Shew_0473 0.13 -0.9 531,700 + Shew_0473 0.13 +1.7 531,700 + Shew_0473 0.13 -1.4 531,700 - Shew_0473 0.13 -0.9 531,700 + Shew_0473 0.13 -0.3 531,707 - Shew_0473 0.15 -0.2 531,708 - Shew_0473 0.15 +1.4 531,708 - Shew_0473 0.15 +0.6 531,708 - Shew_0473 0.15 -2.3 531,708 - Shew_0473 0.15 +0.6 531,708 - Shew_0473 0.15 -0.0 531,708 - Shew_0473 0.15 +0.5 531,708 - Shew_0473 0.15 +0.2 531,708 - Shew_0473 0.15 +0.0 531,708 - Shew_0473 0.15 +0.9 531,708 - Shew_0473 0.15 +0.4 531,708 - Shew_0473 0.15 +0.5 531,708 - Shew_0473 0.15 +0.0 531,708 - Shew_0473 0.15 -0.3 531,708 - Shew_0473 0.15 -0.6 531,708 - Shew_0473 0.15 +0.1 531,708 - Shew_0473 0.15 +1.1 531,708 - Shew_0473 0.15 -0.0 531,708 - Shew_0473 0.15 -0.8 531,714 + Shew_0473 0.16 +0.1 531,723 + Shew_0473 0.18 -0.7 531,802 + Shew_0473 0.33 -0.2 531,802 + Shew_0473 0.33 +0.4 531,807 + Shew_0473 0.34 -0.0 531,808 + Shew_0473 0.34 +2.1 531,810 - Shew_0473 0.34 +0.5 531,810 - Shew_0473 0.34 -1.3 531,820 + Shew_0473 0.36 -0.3 531,824 + Shew_0473 0.37 +1.2 531,827 - Shew_0473 0.38 -0.3 531,832 - Shew_0473 0.38 -0.1 531,869 + Shew_0473 0.45 +0.1 531,918 + Shew_0473 0.55 -2.6 531,921 - Shew_0473 0.55 +0.3 531,926 - Shew_0473 0.56 +0.0 531,980 + Shew_0473 0.66 +0.5 532,050 - Shew_0473 0.80 -0.3 532,061 + Shew_0473 0.82 +0.2 532,071 + Shew_0473 0.84 -2.1 532,071 + Shew_0473 0.84 +0.6 532,078 + Shew_0473 0.85 +0.3 532,086 - Shew_0473 0.87 +0.8 532,086 - Shew_0473 0.87 +0.2 532,087 - Shew_0473 0.87 -0.7
Or see this region's nucleotide sequence