Strain Fitness in Shewanella loihica PV-4 around Shew_0178

Experiment: LB

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 187,374 to 190,714
download SVG
500 ntrpsE and Shew_0176 are separated by 5 nucleotidesShew_0176 and rplO are separated by 3 nucleotidesrplO and secY are separated by 7 nucleotidessecY and rpmJ are separated by 21 nucleotidesrpmJ and rpsM are separated by 117 nucleotidesrpsM and Shew_0181 are separated by 17 nucleotides Shew_0175: rpsE - 30S ribosomal protein S5 (RefSeq), at 187,237 to 187,740 rpsE Shew_0176: Shew_0176 - ribosomal protein L30 (RefSeq), at 187,746 to 187,928 _0176 Shew_0177: rplO - 50S ribosomal protein L15 (RefSeq), at 187,932 to 188,366 rplO Shew_0178: secY - preprotein translocase subunit SecY (RefSeq), at 188,374 to 189,714 secY Shew_0179: rpmJ - 50S ribosomal protein L36 (RefSeq), at 189,736 to 189,849 rpmJ Shew_0180: rpsM - 30S ribosomal protein S13 (RefSeq), at 189,967 to 190,323 rpsM Shew_0181: Shew_0181 - 30S ribosomal protein S11 (RefSeq), at 190,341 to 190,733 _0181