Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt moaA and Shew_0088 are separated by 111 nucleotides Shew_0088 and moaC overlap by 8 nucleotides moaC and Shew_0090 are separated by 49 nucleotides Shew_0090 and Shew_0091 are separated by 1 nucleotides Shew_0091 and Shew_0092 are separated by 33 nucleotides
Shew_0087: moaA - molybdenum cofactor biosynthesis protein A (RefSeq), at 101,556 to 102,569
moaA
Shew_0088: Shew_0088 - molybdenum cofactor biosynthesis protein B (RefSeq), at 102,681 to 103,211
_0088
Shew_0089: moaC - molybdenum cofactor biosynthesis protein C (RefSeq), at 103,204 to 103,680
moaC
Shew_0090: Shew_0090 - molybdopterin converting factor, subunit 1 (RefSeq), at 103,730 to 103,981
_0090
Shew_0091: Shew_0091 - molybdopterin biosynthesis MoaE (RefSeq), at 103,983 to 104,450
_0091
Shew_0092: Shew_0092 - molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq), at 104,484 to 105,308
_0092
Position (kb) 103
104 Strain fitness (log2 ratio) -1
0
1 at 102.445 kb on + strand, within moaA at 102.445 kb on + strand, within moaA at 102.445 kb on + strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.476 kb on + strand at 102.488 kb on + strand at 102.609 kb on + strand at 102.658 kb on + strand at 102.685 kb on - strand at 102.726 kb on + strand at 102.737 kb on + strand, within Shew_0088 at 102.753 kb on - strand, within Shew_0088 at 103.015 kb on + strand, within Shew_0088 at 103.023 kb on - strand, within Shew_0088 at 103.038 kb on + strand, within Shew_0088 at 103.143 kb on + strand, within Shew_0088 at 103.172 kb on - strand at 103.601 kb on - strand, within moaC at 104.069 kb on - strand, within Shew_0091 at 104.211 kb on + strand, within Shew_0091 at 104.219 kb on - strand, within Shew_0091 at 104.505 kb on + strand at 104.513 kb on - strand at 104.535 kb on + strand at 104.538 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 102,445 + moaA Shew_0087 0.88 -0.5 102,445 + moaA Shew_0087 0.88 +0.7 102,445 + moaA Shew_0087 0.88 -0.1 102,453 - moaA Shew_0087 0.88 +0.3 102,453 - moaA Shew_0087 0.88 -0.2 102,453 - moaA Shew_0087 0.88 +0.1 102,453 - moaA Shew_0087 0.88 +0.2 102,476 + +1.6 102,488 + +0.3 102,609 + +0.3 102,658 + +0.1 102,685 - +0.6 102,726 + +1.5 102,737 + Shew_0088 0.11 +0.3 102,753 - Shew_0088 0.14 -0.0 103,015 + Shew_0088 0.63 -0.3 103,023 - Shew_0088 0.64 +0.7 103,038 + Shew_0088 0.67 +0.2 103,143 + Shew_0088 0.87 -0.4 103,172 - -0.3 103,601 - moaC Shew_0089 0.83 -0.5 104,069 - Shew_0091 0.18 +0.2 104,211 + Shew_0091 0.49 +0.2 104,219 - Shew_0091 0.50 +0.1 104,505 + -0.9 104,513 - -0.8 104,535 + -0.0 104,538 - +0.0
Or see this region's nucleotide sequence