Experiment: 3-octanone 2.655166667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0757 and SMa0758 are separated by 920 nucleotides
SMa0757: SMa0757 - NodD2 nod box-dependent transcription activator, at 409,254 to 410,186
SMa0757
SMa0758: SMa0758 - hypothetical protein, at 411,107 to 411,682
SMa0758
Position (kb) 409
410
411 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 408.275 kb on + strand at 408.308 kb on + strand at 408.309 kb on - strand at 408.386 kb on - strand at 408.475 kb on + strand at 408.476 kb on - strand at 408.501 kb on - strand at 408.508 kb on + strand at 408.508 kb on + strand at 408.508 kb on + strand at 408.526 kb on + strand at 408.551 kb on - strand at 408.551 kb on - strand at 408.551 kb on - strand at 408.583 kb on + strand at 408.644 kb on - strand at 408.644 kb on - strand at 408.875 kb on + strand at 408.884 kb on - strand at 408.884 kb on - strand at 408.886 kb on + strand at 408.887 kb on - strand at 408.908 kb on - strand at 408.925 kb on + strand at 408.998 kb on + strand at 408.999 kb on - strand at 409.180 kb on - strand at 409.277 kb on - strand at 409.277 kb on - strand at 409.374 kb on - strand, within SMa0757 at 409.583 kb on - strand, within SMa0757 at 409.652 kb on - strand, within SMa0757 at 409.821 kb on + strand, within SMa0757 at 409.822 kb on - strand, within SMa0757 at 409.976 kb on + strand, within SMa0757 at 410.132 kb on - strand at 410.179 kb on + strand at 410.410 kb on + strand at 410.410 kb on + strand at 410.411 kb on - strand at 410.411 kb on - strand at 410.557 kb on + strand at 410.557 kb on + strand at 410.558 kb on - strand at 410.558 kb on - strand at 410.569 kb on + strand at 410.582 kb on + strand at 410.582 kb on + strand at 410.738 kb on + strand at 410.746 kb on + strand at 410.746 kb on + strand at 410.746 kb on + strand at 410.761 kb on + strand at 410.778 kb on + strand at 410.824 kb on - strand at 410.826 kb on - strand at 410.963 kb on + strand at 411.171 kb on + strand, within SMa0758 at 411.171 kb on + strand, within SMa0758 at 411.180 kb on + strand, within SMa0758 at 411.180 kb on + strand, within SMa0758
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 2.655166667 mM remove 408,275 + -0.9 408,308 + +0.1 408,309 - +0.6 408,386 - -0.1 408,475 + -0.8 408,476 - -0.4 408,501 - -0.2 408,508 + +0.5 408,508 + +0.2 408,508 + +0.3 408,526 + -0.2 408,551 - -0.2 408,551 - +0.1 408,551 - -0.1 408,583 + -0.0 408,644 - -1.1 408,644 - +0.0 408,875 + +0.6 408,884 - -0.6 408,884 - +3.1 408,886 + -0.2 408,887 - +0.5 408,908 - +1.1 408,925 + +0.4 408,998 + -0.0 408,999 - -0.9 409,180 - -0.2 409,277 - -0.3 409,277 - -0.6 409,374 - SMa0757 0.13 -0.4 409,583 - SMa0757 0.35 -0.7 409,652 - SMa0757 0.43 -1.1 409,821 + SMa0757 0.61 -0.4 409,822 - SMa0757 0.61 -0.7 409,976 + SMa0757 0.77 -2.3 410,132 - +0.6 410,179 + +0.3 410,410 + -0.6 410,410 + +0.5 410,411 - -0.5 410,411 - +0.5 410,557 + +1.3 410,557 + -0.3 410,558 - +0.5 410,558 - +1.1 410,569 + -0.6 410,582 + -0.3 410,582 + +0.4 410,738 + -0.4 410,746 + -0.0 410,746 + +3.1 410,746 + +0.4 410,761 + -0.7 410,778 + -0.4 410,824 - -0.0 410,826 - +0.2 410,963 + +0.1 411,171 + SMa0758 0.11 -1.3 411,171 + SMa0758 0.11 +0.5 411,180 + SMa0758 0.13 +0.0 411,180 + SMa0758 0.13 +0.2
Or see this region's nucleotide sequence