Experiment: 3-octanone 2.655166667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02413 and SMc02414 are separated by 58 nucleotides SMc02414 and SMc02415 are separated by 188 nucleotides
SMc02413: SMc02413 - aminotransferase, at 2,782,766 to 2,784,079
SMc02413
SMc02414: SMc02414 - hydrolase, at 2,784,138 to 2,785,613
SMc02414
SMc02415: SMc02415 - peptide-binding periplasmic ABC transporter protein, at 2,785,802 to 2,787,382
SMc02415
Position (kb)
2784
2785
2786 Strain fitness (log2 ratio)
-1
0
1 at 2783.171 kb on + strand, within SMc02413 at 2783.270 kb on + strand, within SMc02413 at 2783.270 kb on + strand, within SMc02413 at 2783.270 kb on + strand, within SMc02413 at 2783.270 kb on + strand, within SMc02413 at 2783.271 kb on - strand, within SMc02413 at 2783.271 kb on - strand, within SMc02413 at 2783.271 kb on - strand, within SMc02413 at 2783.271 kb on - strand, within SMc02413 at 2783.918 kb on + strand, within SMc02413 at 2783.918 kb on + strand, within SMc02413 at 2783.918 kb on + strand, within SMc02413 at 2783.919 kb on - strand, within SMc02413 at 2783.919 kb on - strand, within SMc02413 at 2783.922 kb on - strand, within SMc02413 at 2783.922 kb on - strand, within SMc02413 at 2783.922 kb on - strand, within SMc02413 at 2783.922 kb on - strand, within SMc02413 at 2783.922 kb on - strand, within SMc02413 at 2783.922 kb on - strand, within SMc02413 at 2784.001 kb on + strand at 2784.001 kb on + strand at 2784.077 kb on + strand at 2784.283 kb on + strand at 2784.283 kb on + strand at 2784.283 kb on + strand at 2784.283 kb on + strand at 2784.283 kb on + strand at 2784.283 kb on + strand at 2784.283 kb on + strand at 2784.284 kb on - strand at 2784.284 kb on - strand at 2784.284 kb on - strand at 2784.284 kb on - strand at 2784.344 kb on + strand, within SMc02414 at 2784.344 kb on + strand, within SMc02414 at 2784.438 kb on - strand, within SMc02414 at 2784.440 kb on - strand, within SMc02414 at 2784.542 kb on + strand, within SMc02414 at 2784.544 kb on + strand, within SMc02414 at 2784.544 kb on + strand, within SMc02414 at 2784.544 kb on + strand, within SMc02414 at 2784.544 kb on + strand, within SMc02414 at 2784.544 kb on + strand, within SMc02414 at 2784.545 kb on - strand, within SMc02414 at 2784.545 kb on - strand, within SMc02414 at 2784.545 kb on - strand, within SMc02414 at 2784.605 kb on + strand, within SMc02414 at 2784.828 kb on + strand, within SMc02414 at 2784.828 kb on + strand, within SMc02414 at 2784.828 kb on + strand, within SMc02414 at 2784.828 kb on + strand, within SMc02414 at 2784.829 kb on - strand, within SMc02414 at 2785.180 kb on + strand, within SMc02414 at 2785.180 kb on + strand, within SMc02414 at 2785.207 kb on - strand, within SMc02414 at 2785.207 kb on - strand, within SMc02414 at 2785.303 kb on + strand, within SMc02414 at 2785.324 kb on + strand, within SMc02414 at 2785.324 kb on + strand, within SMc02414 at 2785.324 kb on + strand, within SMc02414 at 2785.325 kb on - strand, within SMc02414 at 2785.325 kb on - strand, within SMc02414 at 2785.330 kb on + strand, within SMc02414 at 2785.330 kb on + strand, within SMc02414 at 2785.331 kb on - strand, within SMc02414 at 2785.334 kb on - strand, within SMc02414 at 2785.347 kb on + strand, within SMc02414 at 2785.347 kb on + strand, within SMc02414 at 2785.347 kb on + strand, within SMc02414 at 2785.347 kb on + strand, within SMc02414 at 2785.348 kb on - strand, within SMc02414 at 2785.348 kb on - strand, within SMc02414 at 2785.618 kb on + strand at 2785.619 kb on - strand at 2785.619 kb on - strand at 2785.619 kb on - strand at 2785.748 kb on + strand at 2785.749 kb on - strand at 2785.778 kb on - strand at 2785.916 kb on - strand at 2785.916 kb on - strand at 2785.919 kb on + strand at 2785.919 kb on + strand at 2785.919 kb on + strand at 2785.919 kb on + strand at 2785.920 kb on - strand at 2785.920 kb on - strand at 2785.979 kb on + strand, within SMc02415 at 2785.979 kb on + strand, within SMc02415 at 2785.979 kb on + strand, within SMc02415 at 2785.979 kb on + strand, within SMc02415 at 2785.980 kb on - strand, within SMc02415 at 2785.980 kb on - strand, within SMc02415 at 2785.980 kb on - strand, within SMc02415 at 2785.980 kb on - strand, within SMc02415 at 2785.980 kb on - strand, within SMc02415 at 2785.980 kb on - strand, within SMc02415 at 2786.179 kb on + strand, within SMc02415 at 2786.190 kb on - strand, within SMc02415 at 2786.275 kb on + strand, within SMc02415 at 2786.332 kb on + strand, within SMc02415 at 2786.333 kb on - strand, within SMc02415 at 2786.484 kb on - strand, within SMc02415 at 2786.486 kb on - strand, within SMc02415 at 2786.486 kb on - strand, within SMc02415 at 2786.515 kb on - strand, within SMc02415
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 2.655166667 mM remove 2,783,171 + SMc02413 0.31 -0.0 2,783,270 + SMc02413 0.38 +0.1 2,783,270 + SMc02413 0.38 -0.0 2,783,270 + SMc02413 0.38 -0.7 2,783,270 + SMc02413 0.38 -0.3 2,783,271 - SMc02413 0.38 +1.0 2,783,271 - SMc02413 0.38 +0.1 2,783,271 - SMc02413 0.38 -0.0 2,783,271 - SMc02413 0.38 +0.3 2,783,918 + SMc02413 0.88 -0.6 2,783,918 + SMc02413 0.88 +0.2 2,783,918 + SMc02413 0.88 +0.4 2,783,919 - SMc02413 0.88 +0.1 2,783,919 - SMc02413 0.88 -0.2 2,783,922 - SMc02413 0.88 -0.4 2,783,922 - SMc02413 0.88 +0.2 2,783,922 - SMc02413 0.88 +0.2 2,783,922 - SMc02413 0.88 +0.1 2,783,922 - SMc02413 0.88 +1.0 2,783,922 - SMc02413 0.88 +0.1 2,784,001 + -0.3 2,784,001 + +0.5 2,784,077 + -0.7 2,784,283 + -1.5 2,784,283 + +0.1 2,784,283 + +1.0 2,784,283 + +0.4 2,784,283 + +0.2 2,784,283 + +0.2 2,784,283 + -0.1 2,784,284 - +0.0 2,784,284 - -0.4 2,784,284 - -0.0 2,784,284 - -0.1 2,784,344 + SMc02414 0.14 -0.7 2,784,344 + SMc02414 0.14 -1.1 2,784,438 - SMc02414 0.20 -0.5 2,784,440 - SMc02414 0.20 +0.3 2,784,542 + SMc02414 0.27 -0.8 2,784,544 + SMc02414 0.28 +1.2 2,784,544 + SMc02414 0.28 +0.7 2,784,544 + SMc02414 0.28 -0.2 2,784,544 + SMc02414 0.28 +0.1 2,784,544 + SMc02414 0.28 -0.3 2,784,545 - SMc02414 0.28 +0.9 2,784,545 - SMc02414 0.28 -0.1 2,784,545 - SMc02414 0.28 -0.1 2,784,605 + SMc02414 0.32 -0.7 2,784,828 + SMc02414 0.47 -1.0 2,784,828 + SMc02414 0.47 -0.2 2,784,828 + SMc02414 0.47 -0.6 2,784,828 + SMc02414 0.47 -0.2 2,784,829 - SMc02414 0.47 +1.6 2,785,180 + SMc02414 0.71 -0.6 2,785,180 + SMc02414 0.71 -0.1 2,785,207 - SMc02414 0.72 +0.9 2,785,207 - SMc02414 0.72 -0.1 2,785,303 + SMc02414 0.79 -0.7 2,785,324 + SMc02414 0.80 -0.8 2,785,324 + SMc02414 0.80 +0.4 2,785,324 + SMc02414 0.80 -0.3 2,785,325 - SMc02414 0.80 +0.4 2,785,325 - SMc02414 0.80 +0.2 2,785,330 + SMc02414 0.81 -0.1 2,785,330 + SMc02414 0.81 +1.3 2,785,331 - SMc02414 0.81 -0.5 2,785,334 - SMc02414 0.81 -0.5 2,785,347 + SMc02414 0.82 +1.6 2,785,347 + SMc02414 0.82 -0.8 2,785,347 + SMc02414 0.82 -1.4 2,785,347 + SMc02414 0.82 -0.9 2,785,348 - SMc02414 0.82 -0.5 2,785,348 - SMc02414 0.82 +0.5 2,785,618 + -0.3 2,785,619 - +0.1 2,785,619 - +0.4 2,785,619 - -0.6 2,785,748 + +0.4 2,785,749 - +0.9 2,785,778 - +0.2 2,785,916 - -0.9 2,785,916 - +0.6 2,785,919 + -0.9 2,785,919 + -0.1 2,785,919 + +0.0 2,785,919 + -0.6 2,785,920 - -0.6 2,785,920 - -0.1 2,785,979 + SMc02415 0.11 -0.8 2,785,979 + SMc02415 0.11 -0.7 2,785,979 + SMc02415 0.11 +0.1 2,785,979 + SMc02415 0.11 +0.3 2,785,980 - SMc02415 0.11 -0.0 2,785,980 - SMc02415 0.11 +0.1 2,785,980 - SMc02415 0.11 -0.6 2,785,980 - SMc02415 0.11 -0.3 2,785,980 - SMc02415 0.11 +0.5 2,785,980 - SMc02415 0.11 -0.9 2,786,179 + SMc02415 0.24 +0.4 2,786,190 - SMc02415 0.25 +1.0 2,786,275 + SMc02415 0.30 -0.2 2,786,332 + SMc02415 0.34 -1.6 2,786,333 - SMc02415 0.34 +0.4 2,786,484 - SMc02415 0.43 -0.0 2,786,486 - SMc02415 0.43 -1.0 2,786,486 - SMc02415 0.43 -0.4 2,786,515 - SMc02415 0.45 -0.3
Or see this region's nucleotide sequence