Experiment: 3-octanone 2.655166667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00336 and SMc00337 are separated by 139 nucleotides SMc00337 and SMc00338 are separated by 63 nucleotides SMc00338 and SMc00434 are separated by 391 nucleotides
SMc00336: SMc00336 - hypothetical protein, at 291,267 to 292,847
SMc00336
SMc00337: SMc00337 - hypothetical protein, at 292,987 to 293,319
SMc00337
SMc00338: SMc00338 - hypothetical protein, at 293,383 to 293,910
SMc00338
SMc00434: SMc00434 - tRNA-Leu, at 294,302 to 294,388
SMc00434
Position (kb) 292
293
294 Strain fitness (log2 ratio) -2
-1
0
1 at 292.326 kb on - strand, within SMc00336 at 292.686 kb on + strand, within SMc00336 at 292.860 kb on + strand at 292.860 kb on + strand at 292.860 kb on + strand at 292.860 kb on + strand at 292.861 kb on - strand at 292.875 kb on + strand at 292.886 kb on - strand at 293.057 kb on - strand, within SMc00337 at 293.266 kb on + strand, within SMc00337 at 293.374 kb on + strand at 293.399 kb on + strand at 293.411 kb on + strand at 293.423 kb on + strand at 293.423 kb on + strand at 293.423 kb on + strand at 293.424 kb on - strand at 293.424 kb on - strand at 293.453 kb on + strand, within SMc00338 at 293.453 kb on + strand, within SMc00338 at 293.453 kb on + strand, within SMc00338 at 293.454 kb on - strand, within SMc00338 at 293.523 kb on - strand, within SMc00338 at 293.525 kb on + strand, within SMc00338 at 293.525 kb on + strand, within SMc00338 at 293.526 kb on - strand, within SMc00338 at 293.526 kb on - strand, within SMc00338 at 293.526 kb on - strand, within SMc00338 at 293.526 kb on - strand, within SMc00338 at 293.536 kb on - strand, within SMc00338 at 293.536 kb on - strand at 293.552 kb on + strand, within SMc00338 at 293.553 kb on - strand, within SMc00338 at 293.576 kb on + strand, within SMc00338 at 293.576 kb on + strand, within SMc00338 at 293.577 kb on - strand, within SMc00338 at 293.577 kb on - strand, within SMc00338 at 293.577 kb on - strand, within SMc00338 at 293.577 kb on - strand, within SMc00338 at 293.577 kb on - strand, within SMc00338 at 293.579 kb on + strand, within SMc00338 at 293.591 kb on + strand, within SMc00338 at 293.592 kb on - strand, within SMc00338 at 293.592 kb on - strand, within SMc00338 at 293.607 kb on - strand, within SMc00338 at 293.607 kb on - strand, within SMc00338 at 293.609 kb on + strand, within SMc00338 at 293.609 kb on + strand, within SMc00338 at 293.610 kb on - strand, within SMc00338 at 293.610 kb on - strand, within SMc00338 at 293.613 kb on - strand, within SMc00338 at 293.643 kb on - strand, within SMc00338 at 293.657 kb on + strand, within SMc00338 at 293.658 kb on - strand, within SMc00338 at 293.681 kb on + strand, within SMc00338 at 293.703 kb on - strand, within SMc00338 at 293.720 kb on + strand, within SMc00338 at 293.720 kb on + strand, within SMc00338 at 293.724 kb on - strand, within SMc00338 at 293.724 kb on - strand, within SMc00338 at 293.738 kb on + strand, within SMc00338 at 293.757 kb on - strand, within SMc00338 at 293.845 kb on + strand, within SMc00338 at 293.846 kb on - strand, within SMc00338 at 293.981 kb on - strand at 294.003 kb on + strand at 294.004 kb on - strand at 294.083 kb on + strand at 294.083 kb on + strand at 294.084 kb on - strand at 294.084 kb on - strand at 294.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 2.655166667 mM remove 292,326 - SMc00336 0.67 -0.2 292,686 + SMc00336 0.90 -0.0 292,860 + -0.5 292,860 + +0.2 292,860 + -0.8 292,860 + -1.4 292,861 - -0.4 292,875 + -0.2 292,886 - +0.4 293,057 - SMc00337 0.21 +0.9 293,266 + SMc00337 0.84 +0.3 293,374 + +0.0 293,399 + -0.2 293,411 + -0.1 293,423 + -0.2 293,423 + -1.8 293,423 + -0.8 293,424 - -0.1 293,424 - +0.2 293,453 + SMc00338 0.13 +0.3 293,453 + SMc00338 0.13 +0.0 293,453 + SMc00338 0.13 +0.2 293,454 - SMc00338 0.13 +0.1 293,523 - SMc00338 0.27 +0.4 293,525 + SMc00338 0.27 +0.4 293,525 + SMc00338 0.27 -0.5 293,526 - SMc00338 0.27 +0.5 293,526 - SMc00338 0.27 -0.8 293,526 - SMc00338 0.27 -0.0 293,526 - SMc00338 0.27 -0.0 293,536 - SMc00338 0.29 -0.5 293,536 - -1.3 293,552 + SMc00338 0.32 -0.4 293,553 - SMc00338 0.32 +0.0 293,576 + SMc00338 0.37 +0.3 293,576 + SMc00338 0.37 -0.1 293,577 - SMc00338 0.37 +0.1 293,577 - SMc00338 0.37 -0.3 293,577 - SMc00338 0.37 +0.4 293,577 - SMc00338 0.37 -0.0 293,577 - SMc00338 0.37 -0.2 293,579 + SMc00338 0.37 -0.0 293,591 + SMc00338 0.39 +0.8 293,592 - SMc00338 0.40 -0.2 293,592 - SMc00338 0.40 +1.1 293,607 - SMc00338 0.42 -0.4 293,607 - SMc00338 0.42 +0.1 293,609 + SMc00338 0.43 -0.3 293,609 + SMc00338 0.43 -0.0 293,610 - SMc00338 0.43 +0.0 293,610 - SMc00338 0.43 -0.5 293,613 - SMc00338 0.44 +0.3 293,643 - SMc00338 0.49 -0.1 293,657 + SMc00338 0.52 -0.5 293,658 - SMc00338 0.52 -0.3 293,681 + SMc00338 0.56 -0.2 293,703 - SMc00338 0.61 +0.4 293,720 + SMc00338 0.64 -0.1 293,720 + SMc00338 0.64 +0.6 293,724 - SMc00338 0.65 -0.0 293,724 - SMc00338 0.65 -0.2 293,738 + SMc00338 0.67 -0.6 293,757 - SMc00338 0.71 -0.6 293,845 + SMc00338 0.88 +0.6 293,846 - SMc00338 0.88 +0.9 293,981 - -1.3 294,003 + -0.6 294,004 - +0.0 294,083 + +0.7 294,083 + -0.0 294,084 - +0.4 294,084 - +0.3 294,150 - +0.1
Or see this region's nucleotide sequence