Experiment: 3-octanone 2.655166667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2385 and SMa2387 are separated by 68 nucleotides SMa2387 and SMa2389 are separated by 208 nucleotides SMa2389 and SMa2391 are separated by 304 nucleotides
SMa2385: SMa2385 - ABC transporter ATP-binding protein, at 1,346,715 to 1,348,304
SMa2385
SMa2387: SMa2387 - TetR family transcriptional regulator, at 1,348,373 to 1,349,071
SMa2387
SMa2389: SMa2389 - OsmC-like protein, at 1,349,280 to 1,349,696
SMa2389
SMa2391: SMa2391 - replication initiation protein RepC, at 1,350,001 to 1,351,206
SMa2391
Position (kb)
1348
1349
1350 Strain fitness (log2 ratio)
-1
0
1
2 at 1347.462 kb on - strand, within SMa2385 at 1347.512 kb on + strand, within SMa2385 at 1347.643 kb on + strand, within SMa2385 at 1347.643 kb on + strand, within SMa2385 at 1347.644 kb on - strand, within SMa2385 at 1347.644 kb on - strand, within SMa2385 at 1347.776 kb on + strand, within SMa2385 at 1347.909 kb on - strand, within SMa2385 at 1347.951 kb on + strand, within SMa2385 at 1347.952 kb on - strand, within SMa2385 at 1348.024 kb on - strand, within SMa2385 at 1348.147 kb on - strand at 1348.147 kb on - strand at 1348.147 kb on - strand at 1348.147 kb on - strand at 1348.313 kb on + strand at 1348.314 kb on - strand at 1348.314 kb on - strand at 1348.314 kb on - strand at 1348.356 kb on - strand at 1348.420 kb on + strand at 1348.421 kb on - strand at 1348.708 kb on + strand, within SMa2387 at 1348.748 kb on + strand, within SMa2387 at 1348.760 kb on + strand, within SMa2387 at 1348.761 kb on - strand, within SMa2387 at 1348.761 kb on - strand, within SMa2387 at 1348.761 kb on - strand at 1348.860 kb on + strand, within SMa2387 at 1348.897 kb on + strand, within SMa2387 at 1348.897 kb on + strand, within SMa2387 at 1348.897 kb on + strand, within SMa2387 at 1348.897 kb on + strand, within SMa2387 at 1348.897 kb on + strand, within SMa2387 at 1348.898 kb on - strand, within SMa2387 at 1348.902 kb on + strand, within SMa2387 at 1348.902 kb on + strand, within SMa2387 at 1349.198 kb on + strand at 1349.230 kb on - strand at 1349.238 kb on + strand at 1349.329 kb on + strand, within SMa2389 at 1349.489 kb on + strand, within SMa2389 at 1349.489 kb on + strand, within SMa2389 at 1349.490 kb on - strand, within SMa2389 at 1349.511 kb on + strand, within SMa2389 at 1349.522 kb on + strand, within SMa2389 at 1349.523 kb on - strand, within SMa2389 at 1349.654 kb on + strand, within SMa2389 at 1349.670 kb on - strand at 1349.671 kb on + strand at 1349.759 kb on + strand at 1349.759 kb on + strand at 1349.759 kb on + strand at 1349.760 kb on - strand at 1349.805 kb on + strand at 1349.806 kb on - strand at 1349.806 kb on - strand at 1349.824 kb on + strand at 1349.848 kb on + strand at 1349.953 kb on + strand at 1349.953 kb on + strand at 1349.953 kb on + strand at 1349.953 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 2.655166667 mM remove 1,347,462 - SMa2385 0.47 -0.8 1,347,512 + SMa2385 0.50 +0.5 1,347,643 + SMa2385 0.58 -0.1 1,347,643 + SMa2385 0.58 -1.5 1,347,644 - SMa2385 0.58 -0.1 1,347,644 - SMa2385 0.58 +0.6 1,347,776 + SMa2385 0.67 +1.8 1,347,909 - SMa2385 0.75 -0.6 1,347,951 + SMa2385 0.78 -0.0 1,347,952 - SMa2385 0.78 +0.7 1,348,024 - SMa2385 0.82 -0.1 1,348,147 - +0.0 1,348,147 - +0.0 1,348,147 - -1.0 1,348,147 - +0.8 1,348,313 + -1.2 1,348,314 - +0.0 1,348,314 - -0.6 1,348,314 - +0.3 1,348,356 - +0.3 1,348,420 + -1.2 1,348,421 - -0.6 1,348,708 + SMa2387 0.48 -0.7 1,348,748 + SMa2387 0.54 +0.4 1,348,760 + SMa2387 0.55 +0.2 1,348,761 - SMa2387 0.56 +0.7 1,348,761 - SMa2387 0.56 -0.5 1,348,761 - -0.5 1,348,860 + SMa2387 0.70 -0.1 1,348,897 + SMa2387 0.75 +0.5 1,348,897 + SMa2387 0.75 +0.5 1,348,897 + SMa2387 0.75 +0.2 1,348,897 + SMa2387 0.75 -0.6 1,348,897 + SMa2387 0.75 +0.5 1,348,898 - SMa2387 0.75 +1.4 1,348,902 + SMa2387 0.76 +0.3 1,348,902 + SMa2387 0.76 +0.8 1,349,198 + -0.5 1,349,230 - +0.5 1,349,238 + -0.3 1,349,329 + SMa2389 0.12 +1.8 1,349,489 + SMa2389 0.50 -0.6 1,349,489 + SMa2389 0.50 +1.3 1,349,490 - SMa2389 0.50 +0.3 1,349,511 + SMa2389 0.55 +2.1 1,349,522 + SMa2389 0.58 +0.0 1,349,523 - SMa2389 0.58 +1.3 1,349,654 + SMa2389 0.90 -1.0 1,349,670 - +0.5 1,349,671 + +0.2 1,349,759 + +0.5 1,349,759 + -0.5 1,349,759 + +0.2 1,349,760 - -0.9 1,349,805 + +0.1 1,349,806 - +0.5 1,349,806 - +0.1 1,349,824 + -0.4 1,349,848 + -0.3 1,349,953 + +0.7 1,349,953 + +1.1 1,349,953 + -0.7 1,349,953 + +0.6
Or see this region's nucleotide sequence