Experiment: 3-octanone 2.655166667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0355 and SMa0357 are separated by 855 nucleotides SMa0357 and SMa0359 are separated by 8 nucleotides SMa0359 and SMa0360 overlap by 4 nucleotides
SMa0355: SMa0355 - LysR family transcriptional regulator, at 191,922 to 192,416
SMa0355
SMa0357: SMa0357 - hypothetical protein, at 193,272 to 193,553
SMa0357
SMa0359: SMa0359 - hypothetical protein, at 193,562 to 193,807
SMa0359
SMa0360: SMa0360 - transposase, at 193,804 to 194,493
SMa0360
Position (kb) 193
194 Strain fitness (log2 ratio) -2
-1
0
1 at 192.297 kb on - strand, within SMa0355 at 192.627 kb on + strand at 192.627 kb on + strand at 192.630 kb on + strand at 192.630 kb on + strand at 192.644 kb on + strand at 192.645 kb on - strand at 192.676 kb on + strand at 192.677 kb on - strand at 192.808 kb on + strand at 192.840 kb on - strand at 192.840 kb on - strand at 192.841 kb on + strand at 192.841 kb on + strand at 192.910 kb on + strand at 192.911 kb on - strand at 192.911 kb on - strand at 192.914 kb on + strand at 192.915 kb on - strand at 192.957 kb on - strand at 193.012 kb on + strand at 193.060 kb on + strand at 193.103 kb on - strand at 193.124 kb on - strand at 193.295 kb on + strand at 193.296 kb on - strand at 193.317 kb on + strand, within SMa0357 at 193.317 kb on + strand, within SMa0357 at 193.371 kb on + strand, within SMa0357 at 193.371 kb on + strand, within SMa0357 at 193.402 kb on + strand, within SMa0357 at 193.433 kb on + strand, within SMa0357 at 193.563 kb on + strand at 193.633 kb on + strand, within SMa0359 at 193.634 kb on - strand, within SMa0359 at 193.636 kb on - strand, within SMa0359 at 193.674 kb on + strand, within SMa0359 at 193.694 kb on + strand, within SMa0359 at 193.716 kb on + strand, within SMa0359 at 193.730 kb on + strand, within SMa0359 at 193.731 kb on - strand, within SMa0359 at 193.731 kb on - strand, within SMa0359 at 193.790 kb on + strand at 193.813 kb on + strand at 193.814 kb on - strand at 193.814 kb on - strand at 193.963 kb on - strand, within SMa0360 at 194.196 kb on - strand, within SMa0360 at 194.322 kb on + strand, within SMa0360 at 194.512 kb on + strand at 194.513 kb on - strand at 194.537 kb on + strand at 194.537 kb on + strand at 194.538 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 2.655166667 mM remove 192,297 - SMa0355 0.76 +0.4 192,627 + +0.4 192,627 + +1.1 192,630 + -0.3 192,630 + -0.6 192,644 + -0.3 192,645 - -0.1 192,676 + +1.0 192,677 - +0.8 192,808 + -0.2 192,840 - +0.6 192,840 - +0.0 192,841 + +0.4 192,841 + +1.0 192,910 + +0.5 192,911 - -1.1 192,911 - +1.6 192,914 + -0.8 192,915 - +0.4 192,957 - +0.6 193,012 + -0.2 193,060 + +0.1 193,103 - -0.1 193,124 - -0.1 193,295 + -0.4 193,296 - -0.2 193,317 + SMa0357 0.16 +0.0 193,317 + SMa0357 0.16 +1.0 193,371 + SMa0357 0.35 -0.3 193,371 + SMa0357 0.35 -1.7 193,402 + SMa0357 0.46 -2.7 193,433 + SMa0357 0.57 -1.5 193,563 + -1.7 193,633 + SMa0359 0.29 -0.9 193,634 - SMa0359 0.29 -0.5 193,636 - SMa0359 0.30 -0.4 193,674 + SMa0359 0.46 +0.2 193,694 + SMa0359 0.54 +0.0 193,716 + SMa0359 0.63 +0.6 193,730 + SMa0359 0.68 -0.7 193,731 - SMa0359 0.69 -0.2 193,731 - SMa0359 0.69 -0.4 193,790 + -0.2 193,813 + +0.0 193,814 - -0.3 193,814 - -0.1 193,963 - SMa0360 0.23 -0.0 194,196 - SMa0360 0.57 -1.0 194,322 + SMa0360 0.75 -1.6 194,512 + +0.4 194,513 - +0.0 194,537 + +0.6 194,537 + -0.3 194,538 - +0.8
Or see this region's nucleotide sequence