Experiment: 3-octanone 2.655166667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21384 and SM_b21385 are separated by 234 nucleotides SM_b21385 and SM_b21525 are separated by 45 nucleotides
SM_b21384: SM_b21384 - SDR family dehydrogenase, at 1,047,363 to 1,048,106
_b21384
SM_b21385: SM_b21385 - AraC family transcriptional regulator, at 1,048,341 to 1,049,276
_b21385
SM_b21525: SM_b21525 - transcriptional regulator, at 1,049,322 to 1,050,797
_b21525
Position (kb)
1048
1049
1050 Strain fitness (log2 ratio)
-2
-1
0
1 at 1047.515 kb on + strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.517 kb on + strand, within SM_b21384 at 1047.518 kb on - strand, within SM_b21384 at 1047.518 kb on - strand, within SM_b21384 at 1047.530 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.626 kb on - strand, within SM_b21384 at 1047.655 kb on + strand, within SM_b21384 at 1047.674 kb on + strand, within SM_b21384 at 1047.674 kb on + strand, within SM_b21384 at 1047.675 kb on - strand, within SM_b21384 at 1047.779 kb on + strand, within SM_b21384 at 1047.854 kb on + strand, within SM_b21384 at 1047.855 kb on - strand, within SM_b21384 at 1047.855 kb on - strand, within SM_b21384 at 1047.864 kb on + strand, within SM_b21384 at 1047.950 kb on - strand, within SM_b21384 at 1047.950 kb on - strand, within SM_b21384 at 1048.006 kb on - strand, within SM_b21384 at 1048.127 kb on - strand at 1048.151 kb on + strand at 1048.151 kb on + strand at 1048.152 kb on - strand at 1048.152 kb on - strand at 1048.152 kb on - strand at 1048.152 kb on - strand at 1048.261 kb on + strand at 1048.309 kb on + strand at 1048.310 kb on - strand at 1048.371 kb on + strand at 1048.371 kb on + strand at 1048.371 kb on + strand at 1048.372 kb on - strand at 1048.372 kb on - strand at 1048.412 kb on + strand at 1048.413 kb on - strand at 1048.413 kb on - strand at 1048.463 kb on - strand, within SM_b21385 at 1048.463 kb on - strand, within SM_b21385 at 1048.463 kb on - strand, within SM_b21385 at 1048.473 kb on + strand, within SM_b21385 at 1048.519 kb on + strand, within SM_b21385 at 1048.519 kb on + strand, within SM_b21385 at 1048.520 kb on - strand, within SM_b21385 at 1048.541 kb on - strand, within SM_b21385 at 1048.541 kb on - strand, within SM_b21385 at 1048.545 kb on + strand, within SM_b21385 at 1048.545 kb on + strand, within SM_b21385 at 1048.546 kb on - strand, within SM_b21385 at 1048.623 kb on + strand, within SM_b21385 at 1048.623 kb on + strand, within SM_b21385 at 1048.688 kb on + strand, within SM_b21385 at 1048.688 kb on + strand, within SM_b21385 at 1048.688 kb on + strand, within SM_b21385 at 1048.839 kb on + strand, within SM_b21385 at 1048.840 kb on - strand, within SM_b21385 at 1048.840 kb on - strand, within SM_b21385 at 1048.899 kb on + strand, within SM_b21385 at 1048.899 kb on + strand, within SM_b21385 at 1048.899 kb on + strand, within SM_b21385 at 1048.899 kb on + strand, within SM_b21385 at 1048.900 kb on - strand, within SM_b21385 at 1048.900 kb on - strand, within SM_b21385 at 1048.900 kb on - strand, within SM_b21385 at 1048.945 kb on - strand, within SM_b21385 at 1048.945 kb on - strand, within SM_b21385 at 1049.050 kb on - strand, within SM_b21385 at 1049.136 kb on + strand, within SM_b21385 at 1049.167 kb on - strand, within SM_b21385 at 1049.274 kb on + strand at 1049.274 kb on + strand at 1049.275 kb on - strand at 1049.275 kb on - strand at 1049.323 kb on + strand at 1049.618 kb on - strand, within SM_b21525 at 1049.618 kb on - strand, within SM_b21525 at 1049.618 kb on - strand, within SM_b21525 at 1049.650 kb on + strand, within SM_b21525 at 1049.651 kb on - strand, within SM_b21525 at 1049.651 kb on - strand, within SM_b21525 at 1049.767 kb on + strand, within SM_b21525 at 1049.815 kb on + strand, within SM_b21525 at 1049.815 kb on + strand, within SM_b21525 at 1049.815 kb on + strand, within SM_b21525 at 1049.907 kb on + strand, within SM_b21525 at 1049.908 kb on - strand, within SM_b21525 at 1050.257 kb on + strand, within SM_b21525 at 1050.257 kb on + strand, within SM_b21525 at 1050.258 kb on - strand, within SM_b21525 at 1050.259 kb on + strand, within SM_b21525 at 1050.259 kb on + strand, within SM_b21525 at 1050.259 kb on + strand, within SM_b21525 at 1050.260 kb on - strand, within SM_b21525 at 1050.260 kb on - strand, within SM_b21525 at 1050.260 kb on - strand, within SM_b21525 at 1050.260 kb on - strand, within SM_b21525 at 1050.260 kb on - strand, within SM_b21525
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 2.655166667 mM remove 1,047,515 + SM_b21384 0.20 -0.4 1,047,516 - SM_b21384 0.21 -1.8 1,047,516 - SM_b21384 0.21 +0.2 1,047,516 - SM_b21384 0.21 +0.4 1,047,517 + SM_b21384 0.21 +0.7 1,047,518 - SM_b21384 0.21 +0.6 1,047,518 - SM_b21384 0.21 +0.4 1,047,530 + SM_b21384 0.22 -0.5 1,047,625 + SM_b21384 0.35 -0.1 1,047,625 + SM_b21384 0.35 -0.1 1,047,625 + SM_b21384 0.35 -0.3 1,047,625 + SM_b21384 0.35 -0.2 1,047,626 - SM_b21384 0.35 -0.7 1,047,655 + SM_b21384 0.39 +0.1 1,047,674 + SM_b21384 0.42 +0.1 1,047,674 + SM_b21384 0.42 -0.1 1,047,675 - SM_b21384 0.42 +1.7 1,047,779 + SM_b21384 0.56 -0.8 1,047,854 + SM_b21384 0.66 -0.1 1,047,855 - SM_b21384 0.66 -1.0 1,047,855 - SM_b21384 0.66 +0.4 1,047,864 + SM_b21384 0.67 +0.3 1,047,950 - SM_b21384 0.79 +0.6 1,047,950 - SM_b21384 0.79 +0.1 1,048,006 - SM_b21384 0.86 +0.4 1,048,127 - +0.0 1,048,151 + -0.1 1,048,151 + -0.5 1,048,152 - -0.5 1,048,152 - -0.6 1,048,152 - +0.3 1,048,152 - +0.1 1,048,261 + -0.2 1,048,309 + +0.0 1,048,310 - +0.3 1,048,371 + +0.8 1,048,371 + +0.1 1,048,371 + +1.5 1,048,372 - -0.7 1,048,372 - +0.2 1,048,412 + -0.4 1,048,413 - -0.1 1,048,413 - +0.8 1,048,463 - SM_b21385 0.13 +0.3 1,048,463 - SM_b21385 0.13 +0.7 1,048,463 - SM_b21385 0.13 +0.0 1,048,473 + SM_b21385 0.14 -0.3 1,048,519 + SM_b21385 0.19 -0.0 1,048,519 + SM_b21385 0.19 +0.3 1,048,520 - SM_b21385 0.19 -0.2 1,048,541 - SM_b21385 0.21 -0.4 1,048,541 - SM_b21385 0.21 -0.4 1,048,545 + SM_b21385 0.22 +0.4 1,048,545 + SM_b21385 0.22 +0.2 1,048,546 - SM_b21385 0.22 +0.0 1,048,623 + SM_b21385 0.30 -0.1 1,048,623 + SM_b21385 0.30 -0.4 1,048,688 + SM_b21385 0.37 -0.4 1,048,688 + SM_b21385 0.37 +0.1 1,048,688 + SM_b21385 0.37 -0.8 1,048,839 + SM_b21385 0.53 -0.4 1,048,840 - SM_b21385 0.53 +0.1 1,048,840 - SM_b21385 0.53 -1.2 1,048,899 + SM_b21385 0.60 +0.1 1,048,899 + SM_b21385 0.60 +0.1 1,048,899 + SM_b21385 0.60 -0.5 1,048,899 + SM_b21385 0.60 -0.0 1,048,900 - SM_b21385 0.60 -1.2 1,048,900 - SM_b21385 0.60 -1.0 1,048,900 - SM_b21385 0.60 +1.4 1,048,945 - SM_b21385 0.65 -0.2 1,048,945 - SM_b21385 0.65 -0.7 1,049,050 - SM_b21385 0.76 -0.2 1,049,136 + SM_b21385 0.85 -0.4 1,049,167 - SM_b21385 0.88 -0.4 1,049,274 + +1.2 1,049,274 + +0.1 1,049,275 - +0.2 1,049,275 - +1.7 1,049,323 + -0.1 1,049,618 - SM_b21525 0.20 +0.2 1,049,618 - SM_b21525 0.20 +0.2 1,049,618 - SM_b21525 0.20 -0.0 1,049,650 + SM_b21525 0.22 -1.2 1,049,651 - SM_b21525 0.22 -0.2 1,049,651 - SM_b21525 0.22 -0.1 1,049,767 + SM_b21525 0.30 +0.1 1,049,815 + SM_b21525 0.33 -0.2 1,049,815 + SM_b21525 0.33 +0.4 1,049,815 + SM_b21525 0.33 -0.2 1,049,907 + SM_b21525 0.40 +0.2 1,049,908 - SM_b21525 0.40 +0.0 1,050,257 + SM_b21525 0.63 -0.5 1,050,257 + SM_b21525 0.63 +1.7 1,050,258 - SM_b21525 0.63 -0.2 1,050,259 + SM_b21525 0.63 -0.1 1,050,259 + SM_b21525 0.63 +0.3 1,050,259 + SM_b21525 0.63 -0.3 1,050,260 - SM_b21525 0.64 +0.1 1,050,260 - SM_b21525 0.64 -0.9 1,050,260 - SM_b21525 0.64 -0.0 1,050,260 - SM_b21525 0.64 -0.7 1,050,260 - SM_b21525 0.64 -0.8
Or see this region's nucleotide sequence