Experiment: 3-octanone 2.655166667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0774 and SMa0775 are separated by 325 nucleotides SMa0775 and SMa0776 are separated by 405 nucleotides
SMa0774: SMa0774 - NoeB host specific nodulation protein, at 420,721 to 422,382
SMa0774
SMa0775: SMa0775 - hypothetical protein, at 422,708 to 423,034
SMa0775
SMa0776: SMa0776 - TRm23b IS ATP-binding protein, at 423,440 to 424,177
SMa0776
Position (kb)
422
423
424 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 421.713 kb on + strand, within SMa0774 at 421.851 kb on + strand, within SMa0774 at 421.864 kb on + strand, within SMa0774 at 421.910 kb on - strand, within SMa0774 at 421.915 kb on - strand, within SMa0774 at 421.947 kb on - strand, within SMa0774 at 422.094 kb on + strand, within SMa0774 at 422.094 kb on + strand, within SMa0774 at 422.095 kb on - strand, within SMa0774 at 422.122 kb on - strand, within SMa0774 at 422.138 kb on - strand, within SMa0774 at 422.273 kb on + strand at 422.274 kb on - strand at 422.276 kb on + strand at 422.315 kb on - strand at 422.346 kb on + strand at 422.346 kb on + strand at 422.346 kb on + strand at 422.346 kb on + strand at 422.347 kb on - strand at 422.347 kb on - strand at 422.347 kb on - strand at 422.347 kb on - strand at 422.430 kb on - strand at 422.430 kb on - strand at 422.559 kb on - strand at 422.578 kb on - strand at 422.589 kb on + strand at 422.616 kb on + strand at 422.616 kb on + strand at 422.619 kb on - strand at 422.622 kb on + strand at 422.679 kb on + strand at 422.847 kb on - strand, within SMa0775 at 422.927 kb on - strand, within SMa0775 at 422.990 kb on + strand, within SMa0775 at 422.991 kb on - strand, within SMa0775 at 423.140 kb on + strand at 423.140 kb on + strand at 423.140 kb on + strand at 423.140 kb on + strand at 423.307 kb on + strand at 423.549 kb on - strand, within SMa0776
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 2.655166667 mM remove 421,713 + SMa0774 0.60 +1.7 421,851 + SMa0774 0.68 -1.3 421,864 + SMa0774 0.69 +0.1 421,910 - SMa0774 0.72 +2.7 421,915 - SMa0774 0.72 -0.1 421,947 - SMa0774 0.74 -0.6 422,094 + SMa0774 0.83 +1.0 422,094 + SMa0774 0.83 -0.1 422,095 - SMa0774 0.83 -0.3 422,122 - SMa0774 0.84 -1.0 422,138 - SMa0774 0.85 +0.1 422,273 + -1.6 422,274 - +1.3 422,276 + +1.7 422,315 - +0.7 422,346 + -0.7 422,346 + -0.3 422,346 + +0.0 422,346 + -0.9 422,347 - -0.8 422,347 - +0.0 422,347 - -0.5 422,347 - -1.0 422,430 - -0.6 422,430 - +0.6 422,559 - -2.5 422,578 - +0.0 422,589 + -0.1 422,616 + -1.5 422,616 + +0.4 422,619 - -0.9 422,622 + +0.7 422,679 + -0.1 422,847 - SMa0775 0.43 +0.1 422,927 - SMa0775 0.67 -0.2 422,990 + SMa0775 0.86 -1.9 422,991 - SMa0775 0.87 -0.9 423,140 + -0.3 423,140 + +1.4 423,140 + +0.0 423,140 + +0.2 423,307 + -1.3 423,549 - SMa0776 0.15 +0.1
Or see this region's nucleotide sequence