Experiment: 3-octanone 5.310333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03799 and SMc03902 are separated by 256 nucleotides SMc03902 and SMc03800 are separated by 91 nucleotides SMc03800 and SMc03801 are separated by 59 nucleotides
SMc03799: SMc03799 - hypothetical protein, at 3,464,220 to 3,465,209
SMc03799
SMc03902: SMc03902 - tRNA-Gly, at 3,465,466 to 3,465,540
SMc03902
SMc03800: SMc03800 - hypothetical protein, at 3,465,632 to 3,466,306
SMc03800
SMc03801: SMc03801 - thioredoxin protein, at 3,466,366 to 3,467,358
SMc03801
Position (kb)
3465
3466
3467 Strain fitness (log2 ratio)
-1
0
1 at 3464.935 kb on + strand, within SMc03799 at 3465.042 kb on + strand, within SMc03799 at 3465.042 kb on + strand, within SMc03799 at 3465.042 kb on + strand, within SMc03799 at 3465.043 kb on - strand, within SMc03799 at 3465.043 kb on - strand, within SMc03799 at 3465.210 kb on + strand at 3465.210 kb on + strand at 3465.211 kb on - strand at 3465.211 kb on - strand at 3465.211 kb on - strand at 3465.218 kb on + strand at 3465.218 kb on + strand at 3465.218 kb on + strand at 3465.218 kb on + strand at 3465.219 kb on - strand at 3465.219 kb on - strand at 3465.219 kb on - strand at 3465.219 kb on - strand at 3465.239 kb on + strand at 3465.239 kb on + strand at 3465.239 kb on + strand at 3465.240 kb on - strand at 3465.240 kb on - strand at 3465.240 kb on - strand at 3465.754 kb on + strand, within SMc03800 at 3465.755 kb on - strand, within SMc03800 at 3465.977 kb on + strand, within SMc03800 at 3466.089 kb on - strand, within SMc03800 at 3466.309 kb on + strand at 3466.309 kb on + strand at 3466.309 kb on + strand at 3466.310 kb on - strand at 3466.310 kb on - strand at 3466.387 kb on + strand at 3466.388 kb on - strand at 3466.515 kb on + strand, within SMc03801 at 3466.908 kb on - strand, within SMc03801 at 3466.964 kb on - strand, within SMc03801 at 3467.291 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.310333333 mM remove 3,464,935 + SMc03799 0.72 +0.4 3,465,042 + SMc03799 0.83 -0.3 3,465,042 + SMc03799 0.83 -0.1 3,465,042 + SMc03799 0.83 -0.2 3,465,043 - SMc03799 0.83 -0.3 3,465,043 - SMc03799 0.83 -0.2 3,465,210 + -0.6 3,465,210 + -0.6 3,465,211 - -0.1 3,465,211 - +0.1 3,465,211 - -0.2 3,465,218 + -0.1 3,465,218 + -0.8 3,465,218 + -0.2 3,465,218 + +0.1 3,465,219 - -0.1 3,465,219 - -0.3 3,465,219 - +0.3 3,465,219 - -0.2 3,465,239 + -0.0 3,465,239 + -1.3 3,465,239 + -0.1 3,465,240 - -0.3 3,465,240 - -0.5 3,465,240 - +0.4 3,465,754 + SMc03800 0.18 -1.1 3,465,755 - SMc03800 0.18 -1.0 3,465,977 + SMc03800 0.51 -0.8 3,466,089 - SMc03800 0.68 -0.2 3,466,309 + +0.1 3,466,309 + -0.1 3,466,309 + -0.4 3,466,310 - -0.6 3,466,310 - -0.7 3,466,387 + -0.3 3,466,388 - -0.2 3,466,515 + SMc03801 0.15 +0.5 3,466,908 - SMc03801 0.55 +0.8 3,466,964 - SMc03801 0.60 +0.1 3,467,291 + +0.0
Or see this region's nucleotide sequence