Experiment: 3-octanone 5.310333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2333 and SMa2335 are separated by 225 nucleotides SMa2335 and SMa2337 are separated by 271 nucleotides
SMa2333: SMa2333 - potassium-transporting ATPase subunit A, at 1,302,414 to 1,304,123
SMa2333
SMa2335: SMa2335 - hypothetical protein, at 1,304,349 to 1,304,552
SMa2335
SMa2337: SMa2337 - RhtX rhizobactin transporter, at 1,304,824 to 1,306,119
SMa2337
Position (kb)
1304
1305 Strain fitness (log2 ratio)
-1
0
1
2 at 1303.355 kb on - strand, within SMa2333 at 1303.585 kb on + strand, within SMa2333 at 1303.585 kb on + strand, within SMa2333 at 1303.585 kb on + strand, within SMa2333 at 1303.586 kb on - strand, within SMa2333 at 1303.586 kb on - strand, within SMa2333 at 1303.586 kb on - strand, within SMa2333 at 1303.586 kb on - strand, within SMa2333 at 1303.759 kb on + strand, within SMa2333 at 1303.760 kb on - strand, within SMa2333 at 1303.869 kb on - strand, within SMa2333 at 1304.047 kb on + strand at 1304.048 kb on - strand at 1304.255 kb on - strand at 1304.290 kb on + strand at 1304.515 kb on + strand, within SMa2335 at 1304.515 kb on + strand, within SMa2335 at 1304.515 kb on + strand, within SMa2335 at 1304.516 kb on - strand, within SMa2335 at 1304.516 kb on - strand, within SMa2335 at 1304.526 kb on + strand, within SMa2335 at 1304.526 kb on + strand, within SMa2335 at 1304.527 kb on - strand, within SMa2335 at 1304.527 kb on - strand, within SMa2335 at 1304.642 kb on + strand at 1304.642 kb on + strand at 1304.682 kb on + strand at 1304.710 kb on - strand at 1304.717 kb on + strand at 1304.717 kb on + strand at 1304.718 kb on - strand at 1304.948 kb on - strand at 1305.062 kb on + strand, within SMa2337 at 1305.171 kb on + strand, within SMa2337 at 1305.171 kb on + strand, within SMa2337 at 1305.172 kb on - strand, within SMa2337 at 1305.172 kb on - strand, within SMa2337 at 1305.173 kb on + strand, within SMa2337 at 1305.173 kb on + strand, within SMa2337 at 1305.173 kb on + strand, within SMa2337 at 1305.174 kb on - strand, within SMa2337 at 1305.277 kb on + strand, within SMa2337 at 1305.277 kb on + strand, within SMa2337 at 1305.479 kb on + strand, within SMa2337 at 1305.480 kb on - strand, within SMa2337 at 1305.483 kb on + strand, within SMa2337 at 1305.483 kb on + strand, within SMa2337 at 1305.483 kb on + strand, within SMa2337 at 1305.484 kb on - strand, within SMa2337
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.310333333 mM remove 1,303,355 - SMa2333 0.55 -0.1 1,303,585 + SMa2333 0.68 -0.1 1,303,585 + SMa2333 0.68 -1.1 1,303,585 + SMa2333 0.68 +1.0 1,303,586 - SMa2333 0.69 -1.3 1,303,586 - SMa2333 0.69 +0.4 1,303,586 - SMa2333 0.69 -0.4 1,303,586 - SMa2333 0.69 -0.3 1,303,759 + SMa2333 0.79 -0.2 1,303,760 - SMa2333 0.79 -1.6 1,303,869 - SMa2333 0.85 -0.2 1,304,047 + -0.8 1,304,048 - +0.3 1,304,255 - -0.0 1,304,290 + +0.1 1,304,515 + SMa2335 0.81 -0.2 1,304,515 + SMa2335 0.81 -0.6 1,304,515 + SMa2335 0.81 -1.1 1,304,516 - SMa2335 0.82 -1.0 1,304,516 - SMa2335 0.82 +1.6 1,304,526 + SMa2335 0.87 -0.8 1,304,526 + SMa2335 0.87 +0.4 1,304,527 - SMa2335 0.87 -1.0 1,304,527 - SMa2335 0.87 -0.3 1,304,642 + -0.0 1,304,642 + +1.4 1,304,682 + -0.9 1,304,710 - -0.3 1,304,717 + -0.2 1,304,717 + -0.6 1,304,718 - +0.8 1,304,948 - -0.5 1,305,062 + SMa2337 0.18 -0.2 1,305,171 + SMa2337 0.27 -0.1 1,305,171 + SMa2337 0.27 +0.0 1,305,172 - SMa2337 0.27 -0.6 1,305,172 - SMa2337 0.27 +0.3 1,305,173 + SMa2337 0.27 +0.0 1,305,173 + SMa2337 0.27 -0.7 1,305,173 + SMa2337 0.27 +0.6 1,305,174 - SMa2337 0.27 +1.0 1,305,277 + SMa2337 0.35 -0.5 1,305,277 + SMa2337 0.35 -0.5 1,305,479 + SMa2337 0.51 -0.6 1,305,480 - SMa2337 0.51 -0.2 1,305,483 + SMa2337 0.51 -0.3 1,305,483 + SMa2337 0.51 +0.6 1,305,483 + SMa2337 0.51 +2.4 1,305,484 - SMa2337 0.51 +0.2
Or see this region's nucleotide sequence