Experiment: 3-octanone 5.310333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1296 and SMa1297 are separated by 247 nucleotides SMa1297 and SMa1299 are separated by 251 nucleotides SMa1299 and SMa1301 are separated by 34 nucleotides
SMa1296: SMa1296 - alcohol dehydrogenase, at 706,855 to 707,877
SMa1296
SMa1297: SMa1297 - hypothetical protein, at 708,125 to 708,802
SMa1297
SMa1299: SMa1299 - TetR family transcriptional regulator, at 709,054 to 709,665
SMa1299
SMa1301: SMa1301 - Permease, at 709,700 to 710,926
SMa1301
Position (kb) 708
709 Strain fitness (log2 ratio) -1
0
1
2 at 707.129 kb on + strand, within SMa1296 at 707.284 kb on + strand, within SMa1296 at 707.284 kb on + strand, within SMa1296 at 707.284 kb on + strand at 707.285 kb on - strand, within SMa1296 at 707.324 kb on + strand, within SMa1296 at 707.401 kb on + strand, within SMa1296 at 707.411 kb on + strand, within SMa1296 at 707.411 kb on + strand, within SMa1296 at 707.412 kb on - strand, within SMa1296 at 707.497 kb on + strand, within SMa1296 at 707.497 kb on + strand, within SMa1296 at 707.504 kb on + strand, within SMa1296 at 707.505 kb on - strand, within SMa1296 at 707.505 kb on - strand, within SMa1296 at 707.675 kb on + strand, within SMa1296 at 707.676 kb on - strand, within SMa1296 at 707.777 kb on + strand at 707.778 kb on - strand at 707.778 kb on - strand at 707.963 kb on - strand at 708.145 kb on + strand at 708.215 kb on + strand, within SMa1297 at 708.375 kb on + strand, within SMa1297 at 708.375 kb on + strand, within SMa1297 at 708.376 kb on - strand, within SMa1297 at 708.699 kb on - strand, within SMa1297 at 708.774 kb on - strand at 708.774 kb on - strand at 708.895 kb on - strand at 708.969 kb on + strand at 709.214 kb on + strand, within SMa1299 at 709.215 kb on - strand, within SMa1299 at 709.215 kb on - strand, within SMa1299 at 709.215 kb on - strand, within SMa1299 at 709.215 kb on - strand, within SMa1299 at 709.216 kb on + strand, within SMa1299 at 709.216 kb on + strand, within SMa1299 at 709.216 kb on + strand, within SMa1299 at 709.216 kb on + strand, within SMa1299 at 709.217 kb on - strand, within SMa1299 at 709.217 kb on - strand, within SMa1299 at 709.217 kb on - strand, within SMa1299 at 709.217 kb on - strand, within SMa1299 at 709.217 kb on - strand, within SMa1299 at 709.218 kb on + strand, within SMa1299 at 709.269 kb on + strand, within SMa1299 at 709.318 kb on - strand, within SMa1299 at 709.318 kb on - strand, within SMa1299 at 709.355 kb on - strand, within SMa1299
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.310333333 mM remove 707,129 + SMa1296 0.27 -0.0 707,284 + SMa1296 0.42 +0.4 707,284 + SMa1296 0.42 +0.1 707,284 + -1.0 707,285 - SMa1296 0.42 -1.0 707,324 + SMa1296 0.46 -0.7 707,401 + SMa1296 0.53 +0.4 707,411 + SMa1296 0.54 -0.0 707,411 + SMa1296 0.54 -0.1 707,412 - SMa1296 0.54 -0.1 707,497 + SMa1296 0.63 +1.0 707,497 + SMa1296 0.63 -0.8 707,504 + SMa1296 0.63 +0.6 707,505 - SMa1296 0.64 -0.0 707,505 - SMa1296 0.64 -0.2 707,675 + SMa1296 0.80 +0.2 707,676 - SMa1296 0.80 +0.6 707,777 + +1.6 707,778 - +0.3 707,778 - +0.2 707,963 - +0.9 708,145 + -0.1 708,215 + SMa1297 0.13 -0.1 708,375 + SMa1297 0.37 -1.4 708,375 + SMa1297 0.37 +0.4 708,376 - SMa1297 0.37 -0.4 708,699 - SMa1297 0.85 +1.3 708,774 - -0.7 708,774 - +0.5 708,895 - +0.1 708,969 + +0.3 709,214 + SMa1299 0.26 +0.5 709,215 - SMa1299 0.26 +0.9 709,215 - SMa1299 0.26 -1.0 709,215 - SMa1299 0.26 +2.0 709,215 - SMa1299 0.26 +0.6 709,216 + SMa1299 0.26 -0.1 709,216 + SMa1299 0.26 +0.1 709,216 + SMa1299 0.26 -0.6 709,216 + SMa1299 0.26 +0.2 709,217 - SMa1299 0.27 +0.6 709,217 - SMa1299 0.27 +0.6 709,217 - SMa1299 0.27 +0.4 709,217 - SMa1299 0.27 +0.1 709,217 - SMa1299 0.27 +0.1 709,218 + SMa1299 0.27 -0.3 709,269 + SMa1299 0.35 -1.4 709,318 - SMa1299 0.43 +0.8 709,318 - SMa1299 0.43 +0.4 709,355 - SMa1299 0.49 +1.0
Or see this region's nucleotide sequence