Experiment: 3-octanone 5.310333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1174 and SMa1176 are separated by 561 nucleotides SMa1176 and SMa1178 are separated by 279 nucleotides
SMa1172: SMa1172 - hypothetical protein, at 642,642 to 642,890
SMa1172
SMa1174: SMa1174 - hypothetical protein, at 642,811 to 643,314
SMa1174
SMa1176: SMa1176 - hypothetical protein, at 643,876 to 644,394
SMa1176
SMa1178: SMa1178 - hypothetical protein, at 644,674 to 645,504
SMa1178
Position (kb) 643
644
645 Strain fitness (log2 ratio) -2
-1
0
1 at 642.914 kb on - strand, within SMa1174 at 643.192 kb on - strand, within SMa1174 at 643.259 kb on - strand, within SMa1174 at 643.372 kb on + strand at 643.373 kb on - strand at 643.373 kb on - strand at 643.433 kb on + strand at 643.433 kb on + strand at 643.433 kb on + strand at 643.433 kb on + strand at 643.433 kb on + strand at 643.433 kb on + strand at 643.433 kb on + strand at 643.433 kb on + strand at 643.434 kb on - strand at 643.434 kb on - strand at 643.434 kb on - strand at 643.434 kb on - strand at 643.434 kb on - strand at 643.488 kb on + strand at 643.488 kb on + strand at 643.600 kb on - strand at 643.650 kb on + strand at 643.650 kb on + strand at 643.698 kb on + strand at 643.725 kb on - strand at 643.994 kb on - strand, within SMa1176 at 644.183 kb on + strand, within SMa1176 at 644.256 kb on + strand, within SMa1176 at 644.462 kb on + strand at 644.462 kb on + strand at 644.463 kb on - strand at 644.502 kb on - strand at 644.574 kb on - strand at 644.607 kb on - strand at 644.613 kb on + strand at 644.614 kb on - strand at 644.614 kb on - strand at 644.675 kb on + strand at 644.676 kb on - strand at 644.694 kb on - strand at 644.875 kb on + strand, within SMa1178 at 644.875 kb on + strand, within SMa1178 at 644.959 kb on + strand, within SMa1178 at 645.150 kb on - strand, within SMa1178 at 645.150 kb on - strand, within SMa1178 at 645.206 kb on + strand, within SMa1178 at 645.265 kb on + strand, within SMa1178 at 645.266 kb on - strand, within SMa1178 at 645.298 kb on + strand, within SMa1178 at 645.343 kb on + strand, within SMa1178
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.310333333 mM remove 642,914 - SMa1174 0.20 -0.0 643,192 - SMa1174 0.76 -1.2 643,259 - SMa1174 0.89 +0.2 643,372 + +0.4 643,373 - -0.7 643,373 - -0.4 643,433 + +0.9 643,433 + -0.8 643,433 + -0.4 643,433 + +0.0 643,433 + +0.0 643,433 + -0.1 643,433 + -0.4 643,433 + +0.4 643,434 - -0.3 643,434 - -0.1 643,434 - -1.8 643,434 - -0.4 643,434 - +0.6 643,488 + -0.1 643,488 + +0.2 643,600 - +1.0 643,650 + +0.1 643,650 + +1.2 643,698 + +0.2 643,725 - -0.1 643,994 - SMa1176 0.23 +1.4 644,183 + SMa1176 0.59 +0.2 644,256 + SMa1176 0.73 +1.3 644,462 + +0.4 644,462 + +0.6 644,463 - -0.3 644,502 - -0.7 644,574 - +0.3 644,607 - +0.8 644,613 + -0.7 644,614 - +0.4 644,614 - -0.4 644,675 + -0.2 644,676 - -1.9 644,694 - -0.1 644,875 + SMa1178 0.24 -0.1 644,875 + SMa1178 0.24 +0.8 644,959 + SMa1178 0.34 -0.0 645,150 - SMa1178 0.57 +0.2 645,150 - SMa1178 0.57 +0.6 645,206 + SMa1178 0.64 -0.2 645,265 + SMa1178 0.71 +0.4 645,266 - SMa1178 0.71 +1.5 645,298 + SMa1178 0.75 -0.1 645,343 + SMa1178 0.81 -0.8
Or see this region's nucleotide sequence